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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, vacuole

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • mitochondrion 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d045458_P001 Maize endoplasmic reticulum, extracellular 89.74 90.0
HORVU4Hr1G033560.1 Barley cytosol, extracellular 18.77 84.21
Os06t0133600-01 Rice golgi, vacuole 84.16 82.47
TraesCS7A01G071600.1 Wheat vacuole 82.99 82.03
TraesCS4A01G417000.1 Wheat golgi 82.99 81.79
TraesCS7D01G067100.1 Wheat vacuole 82.7 81.5
HORVU3Hr1G007150.2 Barley extracellular 36.36 79.49
GSMUA_Achr1P16640_001 Banana vacuole 68.62 70.48
PGSC0003DMT400038389 Potato cytosol 19.06 64.36
HORVU7Hr1G014410.3 Barley plastid 82.11 62.92
KRH23788 Soybean nucleus 63.64 62.36
Bra022553.1-P Field mustard vacuole 61.0 61.72
CDX91593 Canola vacuole 61.0 61.72
CDY46938 Canola vacuole 61.0 61.72
VIT_16s0022g01430.t01 Wine grape extracellular, golgi 62.76 61.49
KRH40006 Soybean nucleus 62.76 61.49
AT5G51550.1 Thale cress extracellular, vacuole 60.7 61.42
PGSC0003DMT400059235 Potato endoplasmic reticulum, plasma membrane 62.76 61.32
Solyc03g083560.1.1 Tomato nucleus 62.46 61.03
PGSC0003DMT400072046 Potato extracellular, vacuole 60.12 59.08
PGSC0003DMT400072047 Potato extracellular, vacuole 60.12 59.08
Solyc06g034390.1.1 Tomato nucleus 59.82 58.96
EER94575 Sorghum endoplasmic reticulum, plasma membrane 54.84 56.67
EER99411 Sorghum vacuole 50.15 50.0
PGSC0003DMT400089791 Potato cytosol 16.72 41.61
PGSC0003DMT400095305 Potato cytosol 14.66 40.65
EES07217 Sorghum endoplasmic reticulum, extracellular 33.14 36.33
EES05498 Sorghum endoplasmic reticulum, vacuole 32.26 35.48
KXG30713 Sorghum golgi, vacuole 32.55 34.69
EES05496 Sorghum golgi, vacuole 33.43 34.55
KXG19617 Sorghum golgi, mitochondrion, vacuole 32.84 34.15
EER88094 Sorghum endoplasmic reticulum, vacuole 32.55 32.84
OQU81032 Sorghum extracellular 30.21 32.59
EER89439 Sorghum extracellular 31.67 30.59
OQU91894 Sorghum cytosol, endoplasmic reticulum, plasma membrane 31.67 28.8
Protein Annotations
MapMan:35.1EntrezGene:8068392ProteinID:AAQ06267.1EnsemblPlants:EER87789ProteinID:EER87789ProteinID:EER87789.1
InterPro:EXORDIUM-likeGO:GO:0005575GO:GO:0005618GO:GO:0005623GO:GO:0008150GO:GO:0009505
GO:GO:0009506GO:GO:0009628GO:GO:0030312GO:GO:0080167PFAM:PF04674PANTHER:PTHR31279
PANTHER:PTHR31279:SF7UniProt:Q5NKS0EnsemblPlantsGene:SORBI_3010G023400unigene:Sbi.10128SignalP:SignalP-noTMUniParc:UPI000049D9A9
RefSeq:XP_002436422.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr10:+:1892802..1897161
Molecular Weight (calculated)
36309.1 Da
IEP (calculated)
8.038
GRAVY (calculated)
0.015
Length
341 amino acids
Sequence
(BLAST)
001: MQHLGVLLVL AALTASPLAA AWRPWPPRAN GTTAGLGASK KFEGSSEFVK LEYHMGPVLA SAITVHPIWY GAWPAAQKRT IRAFLRSLAP PPDSSARIPP
101: PSVSAWWRTV RLYTDQTSAN VSAAVTLGAE KCDARMSRGA RLSRMDIQSV VRDAVTARTR PLPVDSSGGV YLVLTSPDVS VEDFCGQVCG FHYFTFPSVV
201: GYTLPYAWVG NSARRCPEVC AYPFAIPSYV PGRKAEAPPN GDVGVDGMVS VIAHELAELA SNPLANAWYA GSDPSFPTEI ADLCEGIYGT GGGGAYTGQL
301: LTDARSGAAY NVNGVGGRRF LVQWVWNPVL SYCSGPNALD Q
Best Arabidopsis Sequence Match ( AT5G51550.1 )
(BLAST)
001: MHSLPVNLVL TVLTVFLTSP AQVIGYRPYP PKTNGSDQIF DASKKFEGSS NLVRLRYHMG PVLTNNITVH PIWYGTWQKS QKKIIREFIN SISAVGSKHP
101: SVSGWWKTVQ LYTDQTGSNI TGTVRLGEEK NDRFYSHGKS LTRLSIQSVI KSAVTSRSRP LPVNPKSGLY LLLTADDVYV QDFCGQVCGF HYFTFPSIVG
201: FTLPYAWVGN SAKLCPGVCA YPFAVPAFIP GLKPVKSPNG DVGVDGMISV IAHEIAELAT NPLVNAWYAG PDPVAPVEIA DLCEGIYGTG GGGSYTGQML
301: NDHSGATYNV NGIRRRYLIQ WLWSHVVSYC TGPNALD
Arabidopsis Description
EXL3Protein EXORDIUM-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHM9]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.