Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- extracellular 6
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400072046 | Potato | extracellular, vacuole | 99.71 | 99.71 |
| Solyc06g034390.1.1 | Tomato | nucleus | 94.81 | 95.09 |
| PGSC0003DMT400038389 | Potato | cytosol | 23.34 | 80.2 |
| PGSC0003DMT400059235 | Potato | endoplasmic reticulum, plasma membrane | 79.83 | 79.37 |
| Bra022553.1-P | Field mustard | vacuole | 72.91 | 75.07 |
| CDY46938 | Canola | vacuole | 72.91 | 75.07 |
| CDX91593 | Canola | vacuole | 72.91 | 75.07 |
| AT5G51550.1 | Thale cress | extracellular, vacuole | 72.62 | 74.78 |
| VIT_16s0022g01430.t01 | Wine grape | extracellular, golgi | 72.05 | 71.84 |
| KRH40006 | Soybean | nucleus | 71.18 | 70.98 |
| KRH23788 | Soybean | nucleus | 70.61 | 70.4 |
| HORVU4Hr1G033560.1 | Barley | cytosol, extracellular | 14.12 | 64.47 |
| GSMUA_Achr1P16640_001 | Banana | vacuole | 57.64 | 60.24 |
| EER87789 | Sorghum | golgi, vacuole | 59.08 | 60.12 |
| Os06t0133600-01 | Rice | golgi, vacuole | 59.94 | 59.77 |
| HORVU3Hr1G007150.2 | Barley | extracellular | 25.94 | 57.69 |
| Zm00001d045458_P001 | Maize | endoplasmic reticulum, extracellular | 56.48 | 57.65 |
| TraesCS7D01G067100.1 | Wheat | vacuole | 57.06 | 57.23 |
| TraesCS7A01G071600.1 | Wheat | vacuole | 56.77 | 57.1 |
| TraesCS4A01G417000.1 | Wheat | golgi | 56.77 | 56.94 |
| PGSC0003DMT400043340 | Potato | extracellular | 55.91 | 55.11 |
| PGSC0003DMT400093900 | Potato | mitochondrion | 51.01 | 52.37 |
| PGSC0003DMT400089791 | Potato | cytosol | 20.46 | 51.82 |
| PGSC0003DMT400095305 | Potato | cytosol | 17.87 | 50.41 |
| HORVU7Hr1G014410.3 | Barley | plastid | 57.64 | 44.94 |
| PGSC0003DMT400032756 | Potato | extracellular | 31.41 | 36.21 |
| PGSC0003DMT400079157 | Potato | endoplasmic reticulum, vacuole | 31.12 | 34.62 |
| PGSC0003DMT400079158 | Potato | endoplasmic reticulum, vacuole | 30.84 | 34.41 |
| PGSC0003DMT400079207 | Potato | endoplasmic reticulum, vacuole | 31.41 | 34.28 |
| PGSC0003DMT400079209 | Potato | extracellular | 30.84 | 34.19 |
| PGSC0003DMT400079206 | Potato | endoplasmic reticulum, extracellular | 30.84 | 33.65 |
| PGSC0003DMT400079159 | Potato | vacuole | 30.84 | 33.23 |
| PGSC0003DMT400079208 | Potato | endoplasmic reticulum, vacuole | 30.26 | 33.02 |
| PGSC0003DMT400079160 | Potato | extracellular, golgi | 29.39 | 33.01 |
| PGSC0003DMT400079205 | Potato | endoplasmic reticulum, vacuole | 28.24 | 31.72 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400072047 | EnsemblPlantsGene:PGSC0003DMG400028030 | InterPro:EXORDIUM-like | PANTHER:PTHR31279 | PANTHER:PTHR31279:SF7 | PFAM:PF04674 |
| PGSC:PGSC0003DMG400028030 | SEG:seg | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI0002948D67 | UniProt:M1CPM9 |
| MapMan:35.1 | : | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400028030]
Coordinates
chr6:-:36228117..36229437
Molecular Weight (calculated)
38431.6 Da
IEP (calculated)
8.033
GRAVY (calculated)
-0.193
Length
347 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQCHRSYFP ATFYHLTGIF LLLLTSPVNG WRPWPNQKPN TTDLLYSPSK KYEGSSDLIQ LKYHMGPVLT ANITIYPIWY GRWGKSQKRI IREFINSISA
101: VDSKPPSVSG WWKTVQRYTD QTGANISGNV RIGAEKSDRF YSHGKSLTRL SIQSVIKSAV TAASTTLPLP INSKSGVYLL LTSDDVYVEN FCQDVCGFHY
201: FTFPSIVGYT LPYAWVGNSG KLCPGVCAYP FSVPDYMGRG FKAVKSPNND VGVDGMISVI AHEIAELSTN PLVNAWYAGE DPSFPVEIAD LCEGIYGSGG
301: GGSYTGQMLN GEDGATYNMN GIRRKFLVQW VWNHVVNYCT GPNALDQ
101: VDSKPPSVSG WWKTVQRYTD QTGANISGNV RIGAEKSDRF YSHGKSLTRL SIQSVIKSAV TAASTTLPLP INSKSGVYLL LTSDDVYVEN FCQDVCGFHY
201: FTFPSIVGYT LPYAWVGNSG KLCPGVCAYP FSVPDYMGRG FKAVKSPNND VGVDGMISVI AHEIAELSTN PLVNAWYAGE DPSFPVEIAD LCEGIYGSGG
301: GGSYTGQMLN GEDGATYNMN GIRRKFLVQW VWNHVVNYCT GPNALDQ
001: MHSLPVNLVL TVLTVFLTSP AQVIGYRPYP PKTNGSDQIF DASKKFEGSS NLVRLRYHMG PVLTNNITVH PIWYGTWQKS QKKIIREFIN SISAVGSKHP
101: SVSGWWKTVQ LYTDQTGSNI TGTVRLGEEK NDRFYSHGKS LTRLSIQSVI KSAVTSRSRP LPVNPKSGLY LLLTADDVYV QDFCGQVCGF HYFTFPSIVG
201: FTLPYAWVGN SAKLCPGVCA YPFAVPAFIP GLKPVKSPNG DVGVDGMISV IAHEIAELAT NPLVNAWYAG PDPVAPVEIA DLCEGIYGTG GGGSYTGQML
301: NDHSGATYNV NGIRRRYLIQ WLWSHVVSYC TGPNALD
101: SVSGWWKTVQ LYTDQTGSNI TGTVRLGEEK NDRFYSHGKS LTRLSIQSVI KSAVTSRSRP LPVNPKSGLY LLLTADDVYV QDFCGQVCGF HYFTFPSIVG
201: FTLPYAWVGN SAKLCPGVCA YPFAVPAFIP GLKPVKSPNG DVGVDGMISV IAHEIAELAT NPLVNAWYAG PDPVAPVEIA DLCEGIYGTG GGGSYTGQML
301: NDHSGATYNV NGIRRRYLIQ WLWSHVVSYC TGPNALD
Arabidopsis Description
EXL3Protein EXORDIUM-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHM9]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.