Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 7
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g083560.1.1 | Tomato | nucleus | 97.42 | 97.42 |
| PGSC0003DMT400038389 | Potato | cytosol | 24.07 | 83.17 |
| PGSC0003DMT400072047 | Potato | extracellular, vacuole | 79.37 | 79.83 |
| PGSC0003DMT400072046 | Potato | extracellular, vacuole | 79.37 | 79.83 |
| Bra022553.1-P | Field mustard | vacuole | 71.35 | 73.89 |
| CDY46938 | Canola | vacuole | 71.35 | 73.89 |
| CDX91593 | Canola | vacuole | 71.35 | 73.89 |
| AT5G51550.1 | Thale cress | extracellular, vacuole | 71.06 | 73.59 |
| VIT_16s0022g01430.t01 | Wine grape | extracellular, golgi | 73.35 | 73.56 |
| KRH23788 | Soybean | nucleus | 72.78 | 72.99 |
| KRH40006 | Soybean | nucleus | 72.49 | 72.7 |
| HORVU4Hr1G033560.1 | Barley | cytosol, extracellular | 14.04 | 64.47 |
| EER87789 | Sorghum | golgi, vacuole | 61.32 | 62.76 |
| GSMUA_Achr1P16640_001 | Banana | vacuole | 59.31 | 62.35 |
| Os06t0133600-01 | Rice | golgi, vacuole | 61.6 | 61.78 |
| HORVU3Hr1G007150.2 | Barley | extracellular | 27.51 | 61.54 |
| Zm00001d045458_P001 | Maize | endoplasmic reticulum, extracellular | 59.6 | 61.18 |
| TraesCS4A01G417000.1 | Wheat | golgi | 60.17 | 60.69 |
| TraesCS7A01G071600.1 | Wheat | vacuole | 59.89 | 60.58 |
| TraesCS7D01G067100.1 | Wheat | vacuole | 59.6 | 60.12 |
| PGSC0003DMT400043340 | Potato | extracellular | 56.16 | 55.68 |
| PGSC0003DMT400089791 | Potato | cytosol | 21.49 | 54.74 |
| PGSC0003DMT400093900 | Potato | mitochondrion | 53.01 | 54.73 |
| PGSC0003DMT400095305 | Potato | cytosol | 18.62 | 52.85 |
| HORVU7Hr1G014410.3 | Barley | plastid | 60.46 | 47.42 |
| PGSC0003DMT400032756 | Potato | extracellular | 32.09 | 37.21 |
| PGSC0003DMT400079157 | Potato | endoplasmic reticulum, vacuole | 32.38 | 36.22 |
| PGSC0003DMT400079209 | Potato | extracellular | 32.38 | 36.1 |
| PGSC0003DMT400079158 | Potato | endoplasmic reticulum, vacuole | 31.81 | 35.69 |
| PGSC0003DMT400079160 | Potato | extracellular, golgi | 31.52 | 35.6 |
| PGSC0003DMT400079207 | Potato | endoplasmic reticulum, vacuole | 32.38 | 35.53 |
| PGSC0003DMT400079206 | Potato | endoplasmic reticulum, extracellular | 31.81 | 34.91 |
| PGSC0003DMT400079208 | Potato | endoplasmic reticulum, vacuole | 31.52 | 34.59 |
| PGSC0003DMT400079159 | Potato | vacuole | 31.23 | 33.85 |
| PGSC0003DMT400079205 | Potato | endoplasmic reticulum, vacuole | 27.22 | 30.74 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400059235 | EnsemblPlantsGene:PGSC0003DMG400023011 | EntrezGene:102583379 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:EXORDIUM-like | PANTHER:PTHR31279 | PANTHER:PTHR31279:SF7 | PFAM:PF04674 | PGSC:PGSC0003DMG400023011 | RefSeq:XP_006365250.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI000295DEE0 | UniProt:M1C402 | MapMan:35.1 | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400023011]
Coordinates
chr3:-:40261124..40262406
Molecular Weight (calculated)
39065.5 Da
IEP (calculated)
9.148
GRAVY (calculated)
-0.177
Length
349 amino acids
Sequence
(BLAST)
(BLAST)
001: MSHRSLFRRP EAPVPVIFYF FGAFLFFFFT LPVNGWRPWP NQKPNATELL YGGSKKYEGS SEFVHLKYHM GPVLTANITV YPIWYGRWGN SQKRIIRDFI
101: SSFSAVDSKR PSVAGWWKTV QLYTDQTGAN ISRTVHLGEE KNDRFYSHGK SLTRLSVQSV IKSAVTARTR PLPLNPKTGV YLLLTSDDVY VQDFCQNVCG
201: FHYFTFPSIV GYTLPYAWVG NSAKLCPGTC AYPFSVPSYM PGFKAVKSPN NDVGVDGMIS VIAHEIAEVS TNPLVNAWYA GQDPSFPVEI ADLCEGIYGT
301: GGGGSYTGQM LNGKDGATYN MNGVRRRFLV QWVWNHILNY CSGPNALDQ
101: SSFSAVDSKR PSVAGWWKTV QLYTDQTGAN ISRTVHLGEE KNDRFYSHGK SLTRLSVQSV IKSAVTARTR PLPLNPKTGV YLLLTSDDVY VQDFCQNVCG
201: FHYFTFPSIV GYTLPYAWVG NSAKLCPGTC AYPFSVPSYM PGFKAVKSPN NDVGVDGMIS VIAHEIAEVS TNPLVNAWYA GQDPSFPVEI ADLCEGIYGT
301: GGGGSYTGQM LNGKDGATYN MNGVRRRFLV QWVWNHILNY CSGPNALDQ
001: MHSLPVNLVL TVLTVFLTSP AQVIGYRPYP PKTNGSDQIF DASKKFEGSS NLVRLRYHMG PVLTNNITVH PIWYGTWQKS QKKIIREFIN SISAVGSKHP
101: SVSGWWKTVQ LYTDQTGSNI TGTVRLGEEK NDRFYSHGKS LTRLSIQSVI KSAVTSRSRP LPVNPKSGLY LLLTADDVYV QDFCGQVCGF HYFTFPSIVG
201: FTLPYAWVGN SAKLCPGVCA YPFAVPAFIP GLKPVKSPNG DVGVDGMISV IAHEIAELAT NPLVNAWYAG PDPVAPVEIA DLCEGIYGTG GGGSYTGQML
301: NDHSGATYNV NGIRRRYLIQ WLWSHVVSYC TGPNALD
101: SVSGWWKTVQ LYTDQTGSNI TGTVRLGEEK NDRFYSHGKS LTRLSIQSVI KSAVTSRSRP LPVNPKSGLY LLLTADDVYV QDFCGQVCGF HYFTFPSIVG
201: FTLPYAWVGN SAKLCPGVCA YPFAVPAFIP GLKPVKSPNG DVGVDGMISV IAHEIAELAT NPLVNAWYAG PDPVAPVEIA DLCEGIYGTG GGGSYTGQML
301: NDHSGATYNV NGIRRRYLIQ WLWSHVVSYC TGPNALD
Arabidopsis Description
EXL3Protein EXORDIUM-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHM9]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.