Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 6
- golgi 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400059235 | Potato | endoplasmic reticulum, plasma membrane | 97.42 | 97.42 |
| Solyc06g034390.1.1 | Tomato | nucleus | 77.65 | 78.32 |
| Bra022553.1-P | Field mustard | vacuole | 71.63 | 74.18 |
| CDX91593 | Canola | vacuole | 71.63 | 74.18 |
| CDY46938 | Canola | vacuole | 71.63 | 74.18 |
| AT5G51550.1 | Thale cress | extracellular, vacuole | 71.35 | 73.89 |
| VIT_16s0022g01430.t01 | Wine grape | extracellular, golgi | 73.35 | 73.56 |
| KRH23788 | Soybean | nucleus | 72.78 | 72.99 |
| KRH40006 | Soybean | nucleus | 72.49 | 72.7 |
| HORVU4Hr1G033560.1 | Barley | cytosol, extracellular | 14.04 | 64.47 |
| EER87789 | Sorghum | golgi, vacuole | 61.03 | 62.46 |
| GSMUA_Achr1P16640_001 | Banana | vacuole | 59.31 | 62.35 |
| HORVU3Hr1G007150.2 | Barley | extracellular | 27.51 | 61.54 |
| Os06t0133600-01 | Rice | golgi, vacuole | 61.32 | 61.49 |
| Zm00001d045458_P001 | Maize | endoplasmic reticulum, extracellular | 59.31 | 60.88 |
| TraesCS4A01G417000.1 | Wheat | golgi | 59.6 | 60.12 |
| TraesCS7A01G071600.1 | Wheat | vacuole | 59.31 | 60.0 |
| TraesCS7D01G067100.1 | Wheat | vacuole | 59.31 | 59.83 |
| Solyc10g074540.1.1 | Tomato | nucleus | 55.59 | 56.4 |
| HORVU7Hr1G014410.3 | Barley | plastid | 60.17 | 47.19 |
| Solyc04g074410.1.1 | Tomato | nucleus | 32.38 | 36.22 |
| Solyc01g105410.2.1 | Tomato | endoplasmic reticulum | 31.23 | 36.21 |
| Solyc04g074470.1.1 | Tomato | nucleus | 31.52 | 35.6 |
| Solyc04g074450.1.1 | Tomato | extracellular | 31.81 | 35.35 |
| Solyc04g074440.1.1 | Tomato | nucleus | 31.52 | 34.92 |
| Solyc04g074430.1.1 | Tomato | nucleus | 13.18 | 34.85 |
| Solyc04g074460.1.1 | Tomato | cytosol, plastid | 9.17 | 34.78 |
| Solyc04g074420.1.1 | Tomato | nucleus | 8.31 | 32.58 |
| Solyc04g074400.1.1 | Tomato | nucleus | 27.22 | 30.74 |
Protein Annotations
| EnsemblPlants:Solyc03g083560.1.1 | EnsemblPlantsGene:Solyc03g083560.1 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:EXORDIUM-like |
| PANTHER:PTHR31279 | PANTHER:PTHR31279:SF7 | PFAM:PF04674 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0002768CDD |
| UniProt:K4BID2 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr3:+:53511747..53512796
Molecular Weight (calculated)
38908.2 Da
IEP (calculated)
8.516
GRAVY (calculated)
-0.169
Length
349 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPHSLSRRP EAPVPVIFYF FGAVLFFFFT LPVNGWRPWP NQKPNATELI YGGSKKYEGS SEFVHLKYHM GPVLTANITV YPIWYGRWGN SQKRIIRDFI
101: SSFSAVESKH PSVAGWWKTV QLYTDQTGAN ISRTLHLGEE KNDRFYSHGK SLTRLSVQSV IKSAVTARTR PLPLNPKTGV YLLLTSDDVY VQDFCQNVCG
201: FHYFTFPSIV GYTLPYAWVG NSAKLCPGTC AYPFSVPSYM PGFKAVKSPN NDVGVDGMIS VIAHEIAEVS TNPLVNAWYA GQDPSFPVEI ADLCEGIYGT
301: GGGGSYTGQM LNGEDGATYN MNGVRRRFLV QWVWNHILNY CSGPNALDQ
101: SSFSAVESKH PSVAGWWKTV QLYTDQTGAN ISRTLHLGEE KNDRFYSHGK SLTRLSVQSV IKSAVTARTR PLPLNPKTGV YLLLTSDDVY VQDFCQNVCG
201: FHYFTFPSIV GYTLPYAWVG NSAKLCPGTC AYPFSVPSYM PGFKAVKSPN NDVGVDGMIS VIAHEIAEVS TNPLVNAWYA GQDPSFPVEI ADLCEGIYGT
301: GGGGSYTGQM LNGEDGATYN MNGVRRRFLV QWVWNHILNY CSGPNALDQ
001: MHSLPVNLVL TVLTVFLTSP AQVIGYRPYP PKTNGSDQIF DASKKFEGSS NLVRLRYHMG PVLTNNITVH PIWYGTWQKS QKKIIREFIN SISAVGSKHP
101: SVSGWWKTVQ LYTDQTGSNI TGTVRLGEEK NDRFYSHGKS LTRLSIQSVI KSAVTSRSRP LPVNPKSGLY LLLTADDVYV QDFCGQVCGF HYFTFPSIVG
201: FTLPYAWVGN SAKLCPGVCA YPFAVPAFIP GLKPVKSPNG DVGVDGMISV IAHEIAELAT NPLVNAWYAG PDPVAPVEIA DLCEGIYGTG GGGSYTGQML
301: NDHSGATYNV NGIRRRYLIQ WLWSHVVSYC TGPNALD
101: SVSGWWKTVQ LYTDQTGSNI TGTVRLGEEK NDRFYSHGKS LTRLSIQSVI KSAVTSRSRP LPVNPKSGLY LLLTADDVYV QDFCGQVCGF HYFTFPSIVG
201: FTLPYAWVGN SAKLCPGVCA YPFAVPAFIP GLKPVKSPNG DVGVDGMISV IAHEIAELAT NPLVNAWYAG PDPVAPVEIA DLCEGIYGTG GGGSYTGQML
301: NDHSGATYNV NGIRRRYLIQ WLWSHVVSYC TGPNALD
Arabidopsis Description
EXL3Protein EXORDIUM-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHM9]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.