Factsheet for Solyc04g074450.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 6
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

extracellular: 22364583
nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 22364583 doi

P Shah, AL Powell, R Orlando, C Bergmann, G Gutierrez-Sanchez

Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400079209	Potato	extracellular	97.13	97.44
Solyc04g074410.1.1	Tomato	nucleus	93.95	94.55
Solyc04g074420.1.1	Tomato	nucleus	26.75	94.38
Solyc04g074440.1.1	Tomato	nucleus	91.72	91.43
Solyc04g074430.1.1	Tomato	nucleus	33.44	79.55
VIT_18s0001g06150.t01	Wine grape	vacuole	77.07	75.86
KRH16765	Soybean	nucleus	72.93	73.16
KRH53041	Soybean	nucleus	72.93	70.68
AT4G08950.1	Thale cress	extracellular, vacuole	69.75	69.75
CDX90701	Canola	endoplasmic reticulum, vacuole	68.15	68.81
Bra000660.1-P	Field mustard	endoplasmic reticulum, vacuole	68.79	68.79
CDY05033	Canola	endoplasmic reticulum, vacuole	68.15	68.15
GSMUA_Achr10P...	Banana	cytosol, extracellular, plastid	46.5	67.28
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular	47.13	64.07
Solyc04g074460.1.1	Tomato	cytosol, plastid	18.47	63.04
GSMUA_Achr7P12680_001	Banana	endoplasmic reticulum, extracellular	49.68	60.7
KRH62324	Soybean	nucleus	72.93	60.58
GSMUA_Achr7P12690_001	Banana	extracellular	39.81	60.1
Solyc01g105410.2.1	Tomato	endoplasmic reticulum	57.32	59.8
Os02t0757100-01	Rice	extracellular	58.92	59.49
EES07217	Sorghum	endoplasmic reticulum, extracellular	57.64	58.2
TraesCS6A01G316600.1	Wheat	endoplasmic reticulum, extracellular	57.64	58.2
TraesCS6B01G347100.1	Wheat	endoplasmic reticulum, extracellular	56.69	57.61
HORVU6Hr1G077750.1	Barley	endoplasmic reticulum, extracellular	57.64	57.46
TraesCS6D01G296100.1	Wheat	endoplasmic reticulum, extracellular	56.69	57.23
Zm00001d018107_P001	Maize	endoplasmic reticulum, extracellular	57.01	57.01
Zm00001d052205_P001	Maize	extracellular	57.01	56.83
Solyc04g074470.1.1	Tomato	nucleus	55.73	56.63
Os06t0220000-01	Rice	extracellular	50.96	56.54
Os02t0756200-02	Rice	extracellular	55.1	56.17
TraesCSU01G264500.1	Wheat	plastid	51.59	55.86
HORVU6Hr1G077790.1	Barley	endoplasmic reticulum, extracellular	54.78	55.48
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane	45.54	55.0
Solyc04g074400.1.1	Tomato	nucleus	53.82	54.69
TraesCS6D01G296400.1	Wheat	endoplasmic reticulum, extracellular, vacuole	54.14	54.66
TraesCS6B01G347400.1	Wheat	endoplasmic reticulum, extracellular, vacuole	53.5	54.19
TraesCS6A01G316900.1	Wheat	endoplasmic reticulum, extracellular, vacuole	53.5	54.19
TraesCS7D01G180600.1	Wheat	extracellular	54.46	53.27
Os02t0756600-01	Rice	extracellular	52.87	53.04
HORVU6Hr1G077780.1	Barley	endoplasmic reticulum, extracellular	53.18	53.02
EES05498	Sorghum	endoplasmic reticulum, vacuole	51.91	52.58
TraesCS6B01G347200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	53.18	52.52
TraesCS6D01G296300.1	Wheat	extracellular, plasma membrane	52.55	52.38
TraesCS7B01G084300.1	Wheat	extracellular, golgi	53.82	52.32
TraesCS7D01G180300.1	Wheat	extracellular	53.18	52.19
TraesCS7A01G178400.1	Wheat	extracellular	53.18	52.19
TraesCS6A01G316800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	52.23	52.06
TraesCS6A01G316700.1	Wheat	endoplasmic reticulum	53.18	52.02
TraesCS7A01G178500.1	Wheat	extracellular	53.5	52.01
TraesCS7D01G180400.1	Wheat	extracellular	52.87	51.88
EES05496	Sorghum	golgi, vacuole	54.46	51.82
TraesCS6B01G347300.1	Wheat	endoplasmic reticulum, extracellular	51.91	51.75
TraesCS7B01G084100.1	Wheat	extracellular	53.18	51.7
TraesCS6D01G296200.1	Wheat	endoplasmic reticulum	52.87	51.39
Zm00001d052206_P001	Maize	plastid	52.55	50.77
Zm00001d044864_P001	Maize	mitochondrion	52.87	50.61
EER88094	Sorghum	endoplasmic reticulum, vacuole	54.46	50.59
Os02t0756800-01	Rice	extracellular	51.91	49.7
Os06t0220200-00	Rice	endoplasmic reticulum, extracellular, vacuole	50.32	49.22
Zm00001d018105_P001	Maize	extracellular	49.04	48.89
TraesCS7D01G180500.1	Wheat	extracellular	48.73	48.88
Zm00001d037205_P001	Maize	extracellular	52.23	48.81
KXG30713	Sorghum	golgi, vacuole	48.73	47.81
GSMUA_Achr7P12670_001	Banana	endoplasmic reticulum, extracellular	16.88	47.32
Os06t0220300-00	Rice	extracellular	47.13	46.84
EER89439	Sorghum	extracellular	52.23	46.46
HORVU6Hr1G077770.1	Barley	mitochondrion, plastid	52.87	40.0
Solyc10g074540.1.1	Tomato	nucleus	36.94	33.72
Solyc03g083560.1.1	Tomato	nucleus	35.35	31.81
GSMUA_Achr6P30430_001	Banana	endoplasmic reticulum	26.43	31.8
Solyc06g034390.1.1	Tomato	nucleus	33.44	30.35
Zm00001d018106_P001	Maize	plastid	48.73	25.67
HORVU7Hr1G036780.8	Barley	golgi	27.71	24.72
HORVU6Hr1G077820.1	Barley	endoplasmic reticulum	14.33	22.84

Protein Annotations

EnsemblPlants:Solyc04g074450.1.1	EnsemblPlantsGene:Solyc04g074450.1	InterPro:EXORDIUM-like	PANTHER:PTHR31279	PANTHER:PTHR31279:SF3	PFAM:PF04674
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000276563E	UniProt:K4BTY3	MapMan:35.1	:

Description

No Description!

Coordinates

chr4:-:60438042..60438986

Molecular Weight (calculated)

33674.1 Da

IEP (calculated)

8.761

GRAVY (calculated)

-0.035

Length

314 amino acids

Sequence
(BLAST)

001: MSSSSHFILS LFVLISFINV CFASRKLSAL VQEPQMQLLE YHKGALLSGK ISVNLIWYGK FKPSQRAIVS DFITSLSSST PSKTNPSVAQ WWQTTEKYYH
101: LANSKNTLSL NLGKQVLIEN YSLGKSLTQK QIVQLASKGE QRDAINVVLT ASDVAVDGFC VNRCGTHGSS KGAVIKGKTY KFAYIWVGNS ETLCPGYCAW
201: PFHQPIYGPQ SPPLVAPNND VGVDGMVINL ASLLAGTATN PFGNGYYQGE ADAPLEAASA CPGVYAKGAY PGYAGDLLVD KTTGASYNAH GTNGRKYLVP
301: ALYDPATSSC STLV

Best Arabidopsis Sequence Match ( AT4G08950.1 )
(BLAST)

001: MYLLVFKLFL FLSLLQISVS ARNLASQEPN QFQLLKYHKG ALLSGKISVN LIWYGKFKPS QRAIISDFIT SLTHTSPTSK TLHQPSVATW WKTTEKYYKL
101: ATPSKNSSPL SLTLGKQIID ESCSLGKSLT DKKIQTLASK GDQRNAINVV LTSADVTVTG FGMSRCGTHG HARGLGKRGS KFAYIWVGNS ETQCPGQCAW
201: PFHAPVYGPQ SPPLVAPNND VGLDGMVINL ASLLAGTATN PFGNGYYQGP QNAPLEAASA CPGVYGKGAY PGYAGDLLVD TTTGGSFNAY GANGRKFLLP
301: ALYDPTTSAC STMV

Arabidopsis Description

EXOProtein EXORDIUM [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPE7]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.