Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 4
- vacuole 6
- plasma membrane 5
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400043340 | Potato | extracellular | 95.93 | 93.75 |
| KRG92438 | Soybean | nucleus | 78.78 | 79.24 |
| KRH65072 | Soybean | cytosol | 27.33 | 77.05 |
| VIT_03s0038g03860.t01 | Wine grape | extracellular | 75.87 | 75.87 |
| KRH34361 | Soybean | nucleus | 78.49 | 70.31 |
| Bra002034.1-P | Field mustard | endoplasmic reticulum, vacuole | 72.97 | 70.11 |
| CDY24324 | Canola | endoplasmic reticulum, vacuole | 72.97 | 70.11 |
| CDX71355 | Canola | endoplasmic reticulum, vacuole | 72.67 | 69.44 |
| AT2G17230.1 | Thale cress | endoplasmic reticulum, vacuole | 71.22 | 67.49 |
| Solyc03g083560.1.1 | Tomato | nucleus | 56.4 | 55.59 |
| Solyc06g034390.1.1 | Tomato | nucleus | 55.81 | 55.49 |
| Solyc04g074410.1.1 | Tomato | nucleus | 34.01 | 37.5 |
| Solyc04g074460.1.1 | Tomato | cytosol, plastid | 9.88 | 36.96 |
| Solyc04g074450.1.1 | Tomato | extracellular | 33.72 | 36.94 |
| Solyc01g105410.2.1 | Tomato | endoplasmic reticulum | 31.98 | 36.54 |
| Solyc04g074440.1.1 | Tomato | nucleus | 33.43 | 36.51 |
| Solyc04g074470.1.1 | Tomato | nucleus | 32.27 | 35.92 |
| Solyc04g074420.1.1 | Tomato | nucleus | 9.01 | 34.83 |
| Solyc04g074400.1.1 | Tomato | nucleus | 30.52 | 33.98 |
| Solyc04g074430.1.1 | Tomato | nucleus | 12.79 | 33.33 |
Protein Annotations
| EnsemblPlants:Solyc10g074540.1.1 | EnsemblPlantsGene:Solyc10g074540.1 | InterPro:EXORDIUM-like | PANTHER:PTHR31279 | PANTHER:PTHR31279:SF36 | PFAM:PF04674 |
| SEG:seg | SignalP:SignalP-noTM | UniParc:UPI00027698C5 | UniProt:K4D1P6 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr10:-:58104882..58105916
Molecular Weight (calculated)
37781.0 Da
IEP (calculated)
8.098
GRAVY (calculated)
-0.126
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFFANLFLL FLVIQFGSNN GSEQTLNLIN SNYFNPKLPP RTLSSNKKFE GSSDLVNLRY HMGPVLSSPI NIYLIWYGKW TPSQQLLIKD FLLSVSTFNH
101: RAAPSPSVAE WWSTVSLYTD QTGANISRSV LIAGEYSDRR YSQGTHLTRL SIQDVIAEAV KSKPFTVDHK KGIYLVLTSV DVTMQDFCRA VCGFHYFTFA
201: SKVGYTLPYA WVGNSGKQCP EVCAYPFAVP GYMGGNGPGA LKSPNGDVGV DGMISVIGHE LAELSSNPLV NAWYAGEDPV APTEIGDLCE GLYGTGGGGG
301: YMGQVMKDRD GRTYNLNGRR GRKYLVQWIW NPILKACAGP NAMD
101: RAAPSPSVAE WWSTVSLYTD QTGANISRSV LIAGEYSDRR YSQGTHLTRL SIQDVIAEAV KSKPFTVDHK KGIYLVLTSV DVTMQDFCRA VCGFHYFTFA
201: SKVGYTLPYA WVGNSGKQCP EVCAYPFAVP GYMGGNGPGA LKSPNGDVGV DGMISVIGHE LAELSSNPLV NAWYAGEDPV APTEIGDLCE GLYGTGGGGG
301: YMGQVMKDRD GRTYNLNGRR GRKYLVQWIW NPILKACAGP NAMD
001: MSSPATTITF FFFFTLSSFF YITSSLQNNN NNKHTATVNS LNIPSAAAEI TLVNPKLPPR SLSLTSSKKF EGSSNLVHLR YHMGPVLSSS PINIYVIWYG
101: QWSRPHKSLI RDFLNSISDA KAPSPSVSEW WRTASLYTDQ TGSNVSRSVL IAGEYSDSKY SHGQHLTRLT IQEVIASAAR SASFPVDHKN GMYLVLTSHD
201: VTMQDFCRAV CGFHYFTFPS MVGYTMPYAW VGQSGKQCPE VCAYPFALPG YMGHGGPGEL RPPNGETGVD GMVSVIGHEL AEVVSNPLIN AWYAGEDPTA
301: PTEIGDLCEG LYGSGGGGGY IGQVMRDREG KTFNMNGKGG RKFLVQWIWN PNLKACSGPN SVD
101: QWSRPHKSLI RDFLNSISDA KAPSPSVSEW WRTASLYTDQ TGSNVSRSVL IAGEYSDSKY SHGQHLTRLT IQEVIASAAR SASFPVDHKN GMYLVLTSHD
201: VTMQDFCRAV CGFHYFTFPS MVGYTMPYAW VGQSGKQCPE VCAYPFALPG YMGHGGPGEL RPPNGETGVD GMVSVIGHEL AEVVSNPLIN AWYAGEDPTA
301: PTEIGDLCEG LYGSGGGGGY IGQVMRDREG KTFNMNGKGG RKFLVQWIWN PNLKACSGPN SVD
Arabidopsis Description
EXL5Protein EXORDIUM-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SII5]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.