Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- plastid 3
- extracellular 4
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002034.1-P | Field mustard | endoplasmic reticulum, vacuole | 88.71 | 89.94 |
| CDY24324 | Canola | endoplasmic reticulum, vacuole | 88.71 | 89.94 |
| CDX71355 | Canola | endoplasmic reticulum, vacuole | 88.71 | 89.44 |
| KRH65072 | Soybean | cytosol | 24.52 | 72.95 |
| KRG92438 | Soybean | nucleus | 68.59 | 72.81 |
| VIT_03s0038g03860.t01 | Wine grape | extracellular | 68.87 | 72.67 |
| Solyc10g074540.1.1 | Tomato | nucleus | 67.49 | 71.22 |
| PGSC0003DMT400043340 | Potato | extracellular | 67.22 | 69.32 |
| KRH34361 | Soybean | nucleus | 68.32 | 64.58 |
| AT2G35150.1 | Thale cress | extracellular | 49.31 | 55.42 |
| AT5G51550.1 | Thale cress | extracellular, vacuole | 49.04 | 52.82 |
| AT4G08950.1 | Thale cress | extracellular, vacuole | 30.3 | 35.03 |
| AT5G09440.1 | Thale cress | extracellular | 25.62 | 33.45 |
| AT5G64260.1 | Thale cress | extracellular | 27.55 | 32.79 |
| AT1G35140.1 | Thale cress | extracellular | 27.27 | 32.04 |
| AT3G02970.1 | Thale cress | endoplasmic reticulum, extracellular, golgi | 20.39 | 22.29 |
Protein Annotations
| MapMan:35.1 | EntrezGene:816228 | ProteinID:AAD25141.1 | ProteinID:AEC06601.1 | ArrayExpress:AT2G17230 | EnsemblPlantsGene:AT2G17230 |
| RefSeq:AT2G17230 | TAIR:AT2G17230 | RefSeq:AT2G17230-TAIR-G | EnsemblPlants:AT2G17230.1 | TAIR:AT2G17230.1 | EMBL:AY058063 |
| EMBL:AY088390 | EMBL:AY090303 | Symbol:EXL5 | InterPro:EXORDIUM-like | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0005615 | GO:GO:0048046 | RefSeq:NP_565409.1 | PFAM:PF04674 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31279 | PANTHER:PTHR31279:SF36 |
| UniProt:Q9SII5 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI00000A55BE | SEG:seg | : |
Description
EXL5Protein EXORDIUM-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SII5]
Coordinates
chr2:-:7494536..7496292
Molecular Weight (calculated)
39642.8 Da
IEP (calculated)
7.599
GRAVY (calculated)
-0.209
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSPATTITF FFFFTLSSFF YITSSLQNNN NNKHTATVNS LNIPSAAAEI TLVNPKLPPR SLSLTSSKKF EGSSNLVHLR YHMGPVLSSS PINIYVIWYG
101: QWSRPHKSLI RDFLNSISDA KAPSPSVSEW WRTASLYTDQ TGSNVSRSVL IAGEYSDSKY SHGQHLTRLT IQEVIASAAR SASFPVDHKN GMYLVLTSHD
201: VTMQDFCRAV CGFHYFTFPS MVGYTMPYAW VGQSGKQCPE VCAYPFALPG YMGHGGPGEL RPPNGETGVD GMVSVIGHEL AEVVSNPLIN AWYAGEDPTA
301: PTEIGDLCEG LYGSGGGGGY IGQVMRDREG KTFNMNGKGG RKFLVQWIWN PNLKACSGPN SVD
101: QWSRPHKSLI RDFLNSISDA KAPSPSVSEW WRTASLYTDQ TGSNVSRSVL IAGEYSDSKY SHGQHLTRLT IQEVIASAAR SASFPVDHKN GMYLVLTSHD
201: VTMQDFCRAV CGFHYFTFPS MVGYTMPYAW VGQSGKQCPE VCAYPFALPG YMGHGGPGEL RPPNGETGVD GMVSVIGHEL AEVVSNPLIN AWYAGEDPTA
301: PTEIGDLCEG LYGSGGGGGY IGQVMRDREG KTFNMNGKGG RKFLVQWIWN PNLKACSGPN SVD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.