Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 6
- golgi 6
- extracellular 6
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001070.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 79.82 | 81.04 |
| CDX92021 | Canola | endoplasmic reticulum, extracellular, vacuole | 79.82 | 81.04 |
| CDX74229 | Canola | endoplasmic reticulum, extracellular, vacuole | 79.52 | 80.49 |
| Bra032025.1-P | Field mustard | golgi, plasma membrane, vacuole | 78.31 | 80.25 |
| CDY28728 | Canola | mitochondrion | 75.3 | 60.83 |
| CDY43160 | Canola | cytosol | 75.9 | 46.15 |
| VIT_16s0039g01800.t01 | Wine grape | cytosol | 30.42 | 45.91 |
| KRH60707 | Soybean | plasma membrane, vacuole | 32.23 | 36.27 |
| KRH51406 | Soybean | plasma membrane, vacuole | 31.93 | 35.22 |
| AT5G09440.1 | Thale cress | extracellular | 27.71 | 33.09 |
| AT1G35140.1 | Thale cress | extracellular | 29.52 | 31.72 |
| AT4G08950.1 | Thale cress | extracellular, vacuole | 29.82 | 31.53 |
| AT5G64260.1 | Thale cress | extracellular | 27.71 | 30.16 |
| AT2G35150.1 | Thale cress | extracellular | 23.19 | 23.84 |
| AT5G51550.1 | Thale cress | extracellular, vacuole | 21.99 | 21.66 |
| AT2G17230.1 | Thale cress | endoplasmic reticulum, vacuole | 22.29 | 20.39 |
Protein Annotations
| MapMan:35.1 | EntrezGene:821168 | ProteinID:AAF26962.1 | ProteinID:AEE73886.1 | ArrayExpress:AT3G02970 | EnsemblPlantsGene:AT3G02970 |
| RefSeq:AT3G02970 | TAIR:AT3G02970 | RefSeq:AT3G02970-TAIR-G | EnsemblPlants:AT3G02970.1 | TAIR:AT3G02970.1 | Symbol:EXL6 |
| InterPro:EXORDIUM-like | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005615 | GO:GO:0008150 | GO:GO:0048046 |
| RefSeq:NP_186947.1 | PFAM:PF04674 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001185 | PO:PO:0007115 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009009 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020100 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR31279 | PANTHER:PTHR31279:SF13 | UniProt:Q9M8T8 | SignalP:SignalP-noTM |
| UniParc:UPI00000A2AA2 | SEG:seg | : | : | : | : |
Description
EXL6Protein EXORDIUM-like 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8T8]
Coordinates
chr3:-:668998..670567
Molecular Weight (calculated)
36622.0 Da
IEP (calculated)
8.812
GRAVY (calculated)
-0.279
Length
332 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMASASSSS SSISVIIFLL LAPLCLSREP PSQIPNGTLD LSLLWYGQFT PTQKERVHDF IESLNFDAKE GLDPKVSAWW KVVESYQERF EVKDIYRQKK
101: SNRTVAPRIK VKVVRSYVDE KMKYGKELTM GNGEKLVETA IGNMSKVVPV VLLSAQVRAH GVGFCDGTCQ HNALAKIKGQ KEPRRYIMVS NPEVECPGEC
201: AWPFHTADKG PRGMTYQPAS GEVGADALVI QLATGLADLA TNPDLTKSLF KSETTPYNDD VKKNHESSSM YIVDPATKCT RVFGSGAFPG FTGRIRVDPI
301: TGGAFNSHGI NHLKFLIPSI WDPKTKSCWT PM
101: SNRTVAPRIK VKVVRSYVDE KMKYGKELTM GNGEKLVETA IGNMSKVVPV VLLSAQVRAH GVGFCDGTCQ HNALAKIKGQ KEPRRYIMVS NPEVECPGEC
201: AWPFHTADKG PRGMTYQPAS GEVGADALVI QLATGLADLA TNPDLTKSLF KSETTPYNDD VKKNHESSSM YIVDPATKCT RVFGSGAFPG FTGRIRVDPI
301: TGGAFNSHGI NHLKFLIPSI WDPKTKSCWT PM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.