CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY28728	Canola	mitochondrion	70.51	93.67
Bra032025.1-P	Field mustard	golgi, plasma membrane, vacuole	52.56	88.58
CDX92021	Canola	endoplasmic reticulum, extracellular, vacuole	47.44	79.2
CDX74229	Canola	endoplasmic reticulum, extracellular, vacuole	47.25	78.66
AT3G02970.1	Thale cress	endoplasmic reticulum, extracellular, golgi	46.15	75.9
VIT_16s0039g01800.t01	Wine grape	cytosol	17.77	44.09
KRH60707	Soybean	plasma membrane, vacuole	19.23	35.59
CDY40721	Canola	extracellular	9.89	35.53
KRH51406	Soybean	plasma membrane, vacuole	18.86	34.22
CDY40722	Canola	extracellular	16.48	32.61
CDY63721	Canola	endoplasmic reticulum, extracellular	18.13	32.57
CDY31329	Canola	endoplasmic reticulum, extracellular	17.95	32.24
CDY05033	Canola	endoplasmic reticulum, vacuole	18.32	31.85
CDX90701	Canola	endoplasmic reticulum, vacuole	18.13	31.83
CDY44799	Canola	extracellular	16.3	31.79
CDY21583	Canola	extracellular	17.22	31.65
CDX69904	Canola	endoplasmic reticulum, extracellular	17.22	31.65
CDY44798	Canola	extracellular	15.57	31.37
CDY43802	Canola	endoplasmic reticulum, extracellular	17.03	30.59
CDX84508	Canola	endoplasmic reticulum, extracellular	17.03	30.59
CDY31668	Canola	endoplasmic reticulum, vacuole	14.29	24.3
CDX84257	Canola	extracellular, vacuole	13.74	23.36
CDX91593	Canola	vacuole	13.19	21.36
CDY46938	Canola	vacuole	13.19	21.36
CDX71355	Canola	endoplasmic reticulum, vacuole	13.74	20.83
CDY24324	Canola	endoplasmic reticulum, vacuole	13.55	20.67

Protein Annotations

EnsemblPlants:CDY43160	EnsemblPlantsGene:GSBRNA2T00076135001	Gene3D:3.40.630.30	GO:A0A078HXD5	GO:GO:0003674	GO:GO:0003824
GO:GO:0008080	GO:GO:0016740	InterPro:Acyl_CoA_acyltransferase	InterPro:EXORDIUM-like	InterPro:GNAT_dom	InterPro:IPR000182
PANTHER:PTHR31279	PANTHER:PTHR31279:SF13	PFAM:PF00583	PFAM:PF04674	PFscan:PS51186	ProteinID:CDY43160
ProteinID:CDY43160.1	SUPFAM:SSF55729	UniParc:UPI0004EE98B6	UniProt:A0A078HXD5	MapMan:35.1	:

Description

BnaA05g32260DBnaA05g32260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HXD5]

Coordinates

chrLK032546:+:242929..245689

Molecular Weight (calculated)

61187.6 Da

IEP (calculated)

8.263

GRAVY (calculated)

-0.224

Length

546 amino acids

Sequence
(BLAST)

001: MEEPGISRRP SIYYRPINPN DLDRLEKIHR DIFPIKYESE FFQSVVNGVG IVSWAAVDRN RPGGYSDELI GFVTAKFVLA KESEIDDLIC YGSSQGEETL
101: IYILTLGVVE TYRNHGIAMS LINGVIRYAS GLSSCRGVYL HVIAYNNPAI RLYNKLMFRC VRRLNGFYLI KRQHFDAFLF VYFINGSRSP CSPLEVAMFV
201: VNYMKNGIKS VASKLVRKEE QGLKWLVCKD AGCVLPTQTK PNLGLSSGEP PLQIPNGTLD LSLLWYGEFT PVQKERVQDF IESLNFDSKE GLDPKVSAWW
301: KVVESYQERY EVKEIYRQKS NRTGAPRIKV KIVRSYVDEK MKYGTELTIE NGEKLVETAT ENMSKVVPVV LLSAQVRSHG LGFCNKTCQR YALTVNGKQR
401: PQPYVMVSDP EVQCPGECAW PFHIANKGPH GMTYQPPSGE IGADALVIQL ATGLADVATT PALTESLFKS EPPYITEGNH ISSDYIEEPA TKCTRVFGSG
501: ALPGFTGRIR VDPITGGAFN SHGINHLKFL IPSVWDPKTK SCWTPM

Best Arabidopsis Sequence Match ( AT3G02970.1 )
(BLAST)

001: MAMASASSSS SSISVIIFLL LAPLCLSREP PSQIPNGTLD LSLLWYGQFT PTQKERVHDF IESLNFDAKE GLDPKVSAWW KVVESYQERF EVKDIYRQKK
101: SNRTVAPRIK VKVVRSYVDE KMKYGKELTM GNGEKLVETA IGNMSKVVPV VLLSAQVRAH GVGFCDGTCQ HNALAKIKGQ KEPRRYIMVS NPEVECPGEC
201: AWPFHTADKG PRGMTYQPAS GEVGADALVI QLATGLADLA TNPDLTKSLF KSETTPYNDD VKKNHESSSM YIVDPATKCT RVFGSGAFPG FTGRIRVDPI
301: TGGAFNSHGI NHLKFLIPSI WDPKTKSCWT PM

Arabidopsis Description

EXL6Protein EXORDIUM-like 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8T8]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.