Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005364.1-P | Field mustard | endoplasmic reticulum, vacuole | 99.69 | 99.69 |
| CDX84257 | Canola | extracellular, vacuole | 96.26 | 96.26 |
| AT2G35150.1 | Thale cress | extracellular | 86.92 | 86.38 |
| VIT_01s0011g01920.t01 | Wine grape | vacuole | 63.55 | 61.08 |
| GSMUA_Achr11P... | Banana | cytosol, extracellular, plastid | 52.65 | 58.48 |
| PGSC0003DMT400093900 | Potato | mitochondrion | 61.37 | 58.28 |
| TraesCS2B01G237800.1 | Wheat | extracellular, plasma membrane | 51.4 | 49.85 |
| CDX91593 | Canola | vacuole | 52.02 | 49.55 |
| CDY46938 | Canola | vacuole | 52.02 | 49.55 |
| TraesCS2A01G212700.1 | Wheat | extracellular | 51.09 | 49.55 |
| Os07t0496700-01 | Rice | extracellular | 50.16 | 49.24 |
| CDY24324 | Canola | endoplasmic reticulum, vacuole | 54.83 | 49.16 |
| TraesCS2D01G218500.1 | Wheat | extracellular | 50.47 | 48.94 |
| CDX71355 | Canola | endoplasmic reticulum, vacuole | 54.83 | 48.89 |
| EER99411 | Sorghum | vacuole | 52.02 | 48.83 |
| Zm00001d021544_P001 | Maize | extracellular, vacuole | 50.78 | 48.08 |
| HORVU2Hr1G049410.1 | Barley | extracellular, peroxisome | 51.09 | 43.39 |
| GSMUA_Achr10P... | Banana | nucleus | 36.45 | 37.26 |
| CDX84508 | Canola | endoplasmic reticulum, extracellular | 32.4 | 34.21 |
| CDY63721 | Canola | endoplasmic reticulum, extracellular | 32.4 | 34.21 |
| CDY43802 | Canola | endoplasmic reticulum, extracellular | 32.09 | 33.88 |
| CDY31329 | Canola | endoplasmic reticulum, extracellular | 32.09 | 33.88 |
| CDX90701 | Canola | endoplasmic reticulum, vacuole | 32.09 | 33.12 |
| CDY05033 | Canola | endoplasmic reticulum, vacuole | 32.09 | 32.8 |
| CDY44798 | Canola | extracellular | 27.41 | 32.47 |
| CDX69904 | Canola | endoplasmic reticulum, extracellular | 29.91 | 32.32 |
| CDY21583 | Canola | extracellular | 29.91 | 32.32 |
| CDY40721 | Canola | extracellular | 14.95 | 31.58 |
| CDY40722 | Canola | extracellular | 26.79 | 31.16 |
| CDY44799 | Canola | extracellular | 27.1 | 31.07 |
| CDX92021 | Canola | endoplasmic reticulum, extracellular, vacuole | 24.92 | 24.46 |
| CDX74229 | Canola | endoplasmic reticulum, extracellular, vacuole | 24.92 | 24.39 |
| CDY28728 | Canola | mitochondrion | 24.3 | 18.98 |
| CDY43160 | Canola | cytosol | 24.3 | 14.29 |
Protein Annotations
| EnsemblPlants:CDY31668 | EnsemblPlantsGene:GSBRNA2T00050278001 | InterPro:EXORDIUM-like | PANTHER:PTHR31279 | PANTHER:PTHR31279:SF18 | PFAM:PF04674 |
| ProteinID:CDY31668 | ProteinID:CDY31668.1 | SEG:seg | SignalP:SignalP-noTM | UniParc:UPI0004EDFE8A | UniProt:A0A078H4C6 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA05g08790DBnaA05g08790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H4C6]
Coordinates
chrLK032277:-:224408..225373
Molecular Weight (calculated)
36085.8 Da
IEP (calculated)
6.860
GRAVY (calculated)
-0.147
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MISLIFLFFL SVSFTSNGQF YDESKNYEGS SDLVNLEYHM GPVISSPETS LYIIWYGRWT PTHQSTIRDF IYSVSSPARY PSVYDWWKTV MLYRDQTGSN
101: ITRTLVLSGE FHDSTYSHGS HLSRFSVQSI IRTAVANKLP LNSLNGLYLV LTSDDVEMQE FCRAICGFHY FTFSTVVGAT VPYVWVGNSR KQCPEMCAYP
201: FAQPKPFPGS GFVSREKMKP PNGEVGVDGM ISVIAHELAE VSSNPMLNGW YGGEDAMAPT EIADLCLGVY GSGGGGGYMG IVYKDRWRSV YNVNGVRGRK
301: YLIQWVWDLT RNRCFGPNAM N
101: ITRTLVLSGE FHDSTYSHGS HLSRFSVQSI IRTAVANKLP LNSLNGLYLV LTSDDVEMQE FCRAICGFHY FTFSTVVGAT VPYVWVGNSR KQCPEMCAYP
201: FAQPKPFPGS GFVSREKMKP PNGEVGVDGM ISVIAHELAE VSSNPMLNGW YGGEDAMAPT EIADLCLGVY GSGGGGGYMG IVYKDRWRSV YNVNGVRGRK
301: YLIQWVWDLT RNRCFGPNAM N
001: MSLIIVFFFF SLLLTSNGQF FDESKNYEGS SDLVDLQYHL GPVISSPVTS LYIIWYGRWN PTHQSIIRDF LYSVSAPAPA QYPSVSNWWK TVRLYRDQTG
101: SNITDTLVLS GEFHDSTYSH GSHLTRFSVQ SVIRTALTSK LPLNAVNGLY LVLTSDDVEM QEFCRAICGF HYFTFPSVVG ATVPYAWVGN SERQCPEMCA
201: YPFAQPKPFP GSGFVAREKM KPPNGEVGID GMISVIAHEL AEVSSNPMLN GWYGGEDATA PTEIADLCLG VYGSGGGGGY MGSVYKDRWR NVYNVKGVKG
301: RKYLIQWVWD LNRNRCFGPN AMN
101: SNITDTLVLS GEFHDSTYSH GSHLTRFSVQ SVIRTALTSK LPLNAVNGLY LVLTSDDVEM QEFCRAICGF HYFTFPSVVG ATVPYAWVGN SERQCPEMCA
201: YPFAQPKPFP GSGFVAREKM KPPNGEVGID GMISVIAHEL AEVSSNPMLN GWYGGEDATA PTEIADLCLG VYGSGGGGGY MGSVYKDRWR NVYNVKGVKG
301: RKYLIQWVWD LNRNRCFGPN AMN
Arabidopsis Description
EXL7EXL7 [Source:UniProtKB/TrEMBL;Acc:A0A178VYH7]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.