Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY40722 | Canola | extracellular | 91.88 | 90.22 |
| CDY44799 | Canola | extracellular | 79.34 | 76.79 |
| AT5G09440.1 | Thale cress | extracellular | 76.38 | 74.46 |
| CDY40721 | Canola | extracellular | 41.33 | 73.68 |
| CDX69904 | Canola | endoplasmic reticulum, extracellular | 79.7 | 72.73 |
| CDY21583 | Canola | extracellular | 79.7 | 72.73 |
| CDY31329 | Canola | endoplasmic reticulum, extracellular | 74.54 | 66.45 |
| CDY63721 | Canola | endoplasmic reticulum, extracellular | 74.17 | 66.12 |
| CDY43802 | Canola | endoplasmic reticulum, extracellular | 72.32 | 64.47 |
| CDX84508 | Canola | endoplasmic reticulum, extracellular | 71.22 | 63.49 |
| KRH43888 | Soybean | extracellular | 61.25 | 56.27 |
| KRH18203 | Soybean | nucleus | 61.62 | 55.12 |
| KRH10561 | Soybean | extracellular | 60.15 | 54.88 |
| GSMUA_Achr3P20420_001 | Banana | endoplasmic reticulum, vacuole | 44.28 | 53.81 |
| KRH42138 | Soybean | nucleus | 60.15 | 53.62 |
| VIT_03s0017g01210.t01 | Wine grape | extracellular, vacuole | 60.15 | 53.09 |
| PGSC0003DMT400079160 | Potato | extracellular, golgi | 59.78 | 52.43 |
| Solyc04g074470.1.1 | Tomato | nucleus | 58.67 | 51.46 |
| GSMUA_Achr8P14380_001 | Banana | extracellular | 46.86 | 50.8 |
| GSMUA_Achr6P02120_001 | Banana | endoplasmic reticulum, plasma membrane | 42.8 | 50.43 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, plasma membrane | 53.87 | 48.18 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, vacuole | 54.61 | 47.74 |
| TraesCS7B01G083900.1 | Wheat | endoplasmic reticulum, vacuole | 53.87 | 45.91 |
| TraesCS7D01G180100.1 | Wheat | endoplasmic reticulum, plasma membrane | 53.87 | 45.91 |
| TraesCS7A01G178200.1 | Wheat | endoplasmic reticulum, vacuole | 53.87 | 45.77 |
| Os06t0219900-01 | Rice | extracellular, plasma membrane, vacuole | 52.77 | 45.54 |
| HORVU7Hr1G036710.2 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 52.03 | 44.34 |
| CDX90701 | Canola | endoplasmic reticulum, vacuole | 50.18 | 43.73 |
| Zm00001d037204_P001 | Maize | golgi, mitochondrion | 52.4 | 43.43 |
| CDY05033 | Canola | endoplasmic reticulum, vacuole | 50.18 | 43.31 |
| KXG19617 | Sorghum | golgi, mitochondrion, vacuole | 52.03 | 42.99 |
| Zm00001d052799_P001 | Maize | endoplasmic reticulum, extracellular | 47.97 | 42.35 |
| OQU81032 | Sorghum | extracellular | 49.08 | 42.09 |
| CDX92021 | Canola | endoplasmic reticulum, extracellular, vacuole | 33.21 | 27.52 |
| CDY31668 | Canola | endoplasmic reticulum, vacuole | 32.47 | 27.41 |
| CDX74229 | Canola | endoplasmic reticulum, extracellular, vacuole | 32.47 | 26.83 |
| CDX84257 | Canola | extracellular, vacuole | 31.73 | 26.79 |
| CDY46938 | Canola | vacuole | 31.73 | 25.52 |
| CDX91593 | Canola | vacuole | 31.73 | 25.52 |
| CDY24324 | Canola | endoplasmic reticulum, vacuole | 32.47 | 24.58 |
| CDX71355 | Canola | endoplasmic reticulum, vacuole | 32.47 | 24.44 |
| CDY28728 | Canola | mitochondrion | 31.37 | 20.68 |
| CDY43160 | Canola | cytosol | 31.37 | 15.57 |
Protein Annotations
| EnsemblPlants:CDY44798 | EnsemblPlantsGene:GSBRNA2T00080806001 | InterPro:EXORDIUM-like | PANTHER:PTHR31279 | PANTHER:PTHR31279:SF12 | PFAM:PF04674 |
| ProteinID:CDY44798 | ProteinID:CDY44798.1 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EEAA25 | UniProt:A0A078I6N2 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC02g00890DBnaC02g00890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I6N2]
Coordinates
chrLK032601:+:181208..182080
Molecular Weight (calculated)
28764.8 Da
IEP (calculated)
9.689
GRAVY (calculated)
0.094
Length
271 amino acids
Sequence
(BLAST)
(BLAST)
001: MAYTYRLAAL IVLLSATGFS SAALNISLSV QKNINLNIVW YGNFKPIQRA VIVDFIRSLN SPAAAKGPSV ESWWKTYTGG ASTIVLGKQL LLEDYPLGNS
101: LKNPHLRALS GKLNGGGVGL ITAVLTAKDV SVDRFCMNRC GTHGSKSSSV DGGAYLWVGN SKKQCPGYCA WPFHQPLYGP QTPPLIAPNG DVGVDGMIIN
201: LATLLVNTVT NQEAVSTCTG MFGSGAYPGY PGRVLVDKTT GASYNALGLA GRKYLLPAMW DPQTSKCKTL V
101: LKNPHLRALS GKLNGGGVGL ITAVLTAKDV SVDRFCMNRC GTHGSKSSSV DGGAYLWVGN SKKQCPGYCA WPFHQPLYGP QTPPLIAPNG DVGVDGMIIN
201: LATLLVNTVT NQEAVSTCTG MFGSGAYPGY PGRVLVDKTT GASYNALGLA GRKYLLPAMW DPQTSKCKTL V
001: MASFVMGYFL LFAVAFMCLD ARTDKTQDYT SFQYHKGALL TGDVSINLIW YGKFKPSQRA IVTDFVASLS SSRRSTMAQN PSVATWWKTV EKYYQFRKMT
101: TTRGLSLSLG EQILDQGYSM GKSLTEKNLK DLAAKGGQSY AVNVVLTSAD VTVQGFCMNR CGSHGTGSGS GKKGSRFAYI WVGNSETQCP GQCAWPFHAP
201: VYGPQSPPLV APNNDVGLDG MVINLASLMA ATATNPFGDG YYQGPKTAPL EAGSACTGVY GKGSYPGYAG ELLVDATTGG SYNVKGLNGR KYLLPALFDP
301: KTDSCSTLF
101: TTRGLSLSLG EQILDQGYSM GKSLTEKNLK DLAAKGGQSY AVNVVLTSAD VTVQGFCMNR CGSHGTGSGS GKKGSRFAYI WVGNSETQCP GQCAWPFHAP
201: VYGPQSPPLV APNNDVGLDG MVINLASLMA ATATNPFGDG YYQGPKTAPL EAGSACTGVY GKGSYPGYAG ELLVDATTGG SYNVKGLNGR KYLLPALFDP
301: KTDSCSTLF
Arabidopsis Description
EXL1Protein EXORDIUM-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6E4]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.