Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY40721 | Canola | extracellular | 48.93 | 90.13 |
| CDY40722 | Canola | extracellular | 79.64 | 80.8 |
| CDY44798 | Canola | extracellular | 76.79 | 79.34 |
| AT5G09440.1 | Thale cress | extracellular | 73.57 | 74.1 |
| CDX69904 | Canola | endoplasmic reticulum, extracellular | 76.43 | 72.05 |
| CDY21583 | Canola | extracellular | 76.07 | 71.72 |
| CDY31329 | Canola | endoplasmic reticulum, extracellular | 70.0 | 64.47 |
| CDY63721 | Canola | endoplasmic reticulum, extracellular | 69.64 | 64.14 |
| CDY43802 | Canola | endoplasmic reticulum, extracellular | 66.79 | 61.51 |
| CDX84508 | Canola | endoplasmic reticulum, extracellular | 66.79 | 61.51 |
| KRH18203 | Soybean | nucleus | 58.21 | 53.8 |
| KRH10561 | Soybean | extracellular | 56.07 | 52.86 |
| VIT_03s0017g01210.t01 | Wine grape | extracellular, vacuole | 57.86 | 52.77 |
| KRH42138 | Soybean | nucleus | 57.14 | 52.63 |
| KRH43888 | Soybean | extracellular | 55.0 | 52.2 |
| GSMUA_Achr3P20420_001 | Banana | endoplasmic reticulum, vacuole | 39.64 | 49.78 |
| PGSC0003DMT400079160 | Potato | extracellular, golgi | 53.93 | 48.87 |
| Solyc04g074470.1.1 | Tomato | nucleus | 53.21 | 48.22 |
| GSMUA_Achr6P02120_001 | Banana | endoplasmic reticulum, plasma membrane | 38.93 | 47.39 |
| GSMUA_Achr8P14380_001 | Banana | extracellular | 41.07 | 46.0 |
| CDX90701 | Canola | endoplasmic reticulum, vacuole | 47.5 | 42.77 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, plasma membrane | 46.07 | 42.57 |
| TraesCS7A01G178200.1 | Wheat | endoplasmic reticulum, vacuole | 48.21 | 42.32 |
| TraesCS7B01G083900.1 | Wheat | endoplasmic reticulum, vacuole | 47.86 | 42.14 |
| TraesCS7D01G180100.1 | Wheat | endoplasmic reticulum, plasma membrane | 47.86 | 42.14 |
| Os06t0219900-01 | Rice | extracellular, plasma membrane, vacuole | 47.14 | 42.04 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, vacuole | 46.43 | 41.94 |
| CDY05033 | Canola | endoplasmic reticulum, vacuole | 46.79 | 41.72 |
| HORVU7Hr1G036710.2 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 46.79 | 41.2 |
| OQU81032 | Sorghum | extracellular | 45.71 | 40.51 |
| Zm00001d052799_P001 | Maize | endoplasmic reticulum, extracellular | 44.29 | 40.39 |
| Zm00001d037204_P001 | Maize | golgi, mitochondrion | 46.79 | 40.06 |
| KXG19617 | Sorghum | golgi, mitochondrion, vacuole | 45.71 | 39.02 |
| CDX92021 | Canola | endoplasmic reticulum, extracellular, vacuole | 32.86 | 28.13 |
| CDX74229 | Canola | endoplasmic reticulum, extracellular, vacuole | 32.5 | 27.74 |
| CDY31668 | Canola | endoplasmic reticulum, vacuole | 31.07 | 27.1 |
| CDX84257 | Canola | extracellular, vacuole | 30.36 | 26.48 |
| CDY46938 | Canola | vacuole | 28.93 | 24.04 |
| CDX91593 | Canola | vacuole | 28.93 | 24.04 |
| CDX71355 | Canola | endoplasmic reticulum, vacuole | 29.29 | 22.78 |
| CDY24324 | Canola | endoplasmic reticulum, vacuole | 28.93 | 22.63 |
| CDY28728 | Canola | mitochondrion | 31.79 | 21.65 |
| CDY43160 | Canola | cytosol | 31.79 | 16.3 |
Protein Annotations
| EnsemblPlants:CDY44799 | EnsemblPlantsGene:GSBRNA2T00080807001 | InterPro:EXORDIUM-like | PANTHER:PTHR31279 | PANTHER:PTHR31279:SF12 | PFAM:PF04674 |
| ProteinID:CDY44799 | ProteinID:CDY44799.1 | SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EDE6C5 |
| UniProt:A0A078I5S3 | MapMan:35.1 | : | : | : | : |
Description
BnaC02g00880DBnaC02g00880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I5S3]
Coordinates
chrLK032601:+:192921..193832
Molecular Weight (calculated)
29946.9 Da
IEP (calculated)
8.740
GRAVY (calculated)
0.010
Length
280 amino acids
Sequence
(BLAST)
(BLAST)
001: MVYTYRLAAL LVLLFATVGF SSAMMDEQPF RPSSINNISL NIVWYGKFKP IQRSVIVDFI RSINYSETAA KGPSVASWWK TTEKNKGSAS TIVVGKQHIL
101: EDYPLGKSLK SPHLKALSGK LNGGGVGSIT AVLTAKDVAV EGFCMNRCGT HGSKSSSLDG GAYVWVGNSE EQCPGYCTWP FHQPLYGPRS PPLIAPNGDV
201: GVDGMIINLA TLLVNAVNGD QEPASFCVDR FGSGAYPGYA GRVLVDKTTG ASYNALGLAG RKYLLPAVWD PQAAECRTLV
101: EDYPLGKSLK SPHLKALSGK LNGGGVGSIT AVLTAKDVAV EGFCMNRCGT HGSKSSSLDG GAYVWVGNSE EQCPGYCTWP FHQPLYGPRS PPLIAPNGDV
201: GVDGMIINLA TLLVNAVNGD QEPASFCVDR FGSGAYPGYA GRVLVDKTTG ASYNALGLAG RKYLLPAVWD PQAAECRTLV
001: MASFVMGYFL LFAVAFMCLD ARTDKTQDYT SFQYHKGALL TGDVSINLIW YGKFKPSQRA IVTDFVASLS SSRRSTMAQN PSVATWWKTV EKYYQFRKMT
101: TTRGLSLSLG EQILDQGYSM GKSLTEKNLK DLAAKGGQSY AVNVVLTSAD VTVQGFCMNR CGSHGTGSGS GKKGSRFAYI WVGNSETQCP GQCAWPFHAP
201: VYGPQSPPLV APNNDVGLDG MVINLASLMA ATATNPFGDG YYQGPKTAPL EAGSACTGVY GKGSYPGYAG ELLVDATTGG SYNVKGLNGR KYLLPALFDP
301: KTDSCSTLF
101: TTRGLSLSLG EQILDQGYSM GKSLTEKNLK DLAAKGGQSY AVNVVLTSAD VTVQGFCMNR CGSHGTGSGS GKKGSRFAYI WVGNSETQCP GQCAWPFHAP
201: VYGPQSPPLV APNNDVGLDG MVINLASLMA ATATNPFGDG YYQGPKTAPL EAGSACTGVY GKGSYPGYAG ELLVDATTGG SYNVKGLNGR KYLLPALFDP
301: KTDSCSTLF
Arabidopsis Description
EXL1Protein EXORDIUM-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6E4]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.