CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 6
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001070.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	98.78	99.08
CDX92021	Canola	endoplasmic reticulum, extracellular, vacuole	98.17	98.47
AT3G02970.1	Thale cress	endoplasmic reticulum, extracellular, golgi	80.49	79.52
CDY28728	Canola	mitochondrion	79.57	63.5
CDY43160	Canola	cytosol	78.66	47.25
VIT_16s0039g01800.t01	Wine grape	cytosol	29.88	44.55
CDY40721	Canola	extracellular	16.77	36.18
KRH60707	Soybean	plasma membrane, vacuole	31.71	35.25
KRH51406	Soybean	plasma membrane, vacuole	32.01	34.88
CDY40722	Canola	extracellular	27.74	32.97
CDY44799	Canola	extracellular	27.74	32.5
CDY44798	Canola	extracellular	26.83	32.47
CDY21583	Canola	extracellular	28.96	31.99
CDY63721	Canola	endoplasmic reticulum, extracellular	29.57	31.91
CDX69904	Canola	endoplasmic reticulum, extracellular	28.66	31.65
CDY31329	Canola	endoplasmic reticulum, extracellular	29.27	31.58
CDX90701	Canola	endoplasmic reticulum, vacuole	28.96	30.55
CDY05033	Canola	endoplasmic reticulum, vacuole	28.96	30.25
CDY43802	Canola	endoplasmic reticulum, extracellular	27.74	29.93
CDX84508	Canola	endoplasmic reticulum, extracellular	27.74	29.93
CDY31668	Canola	endoplasmic reticulum, vacuole	24.39	24.92
CDX84257	Canola	extracellular, vacuole	24.39	24.92
CDY46938	Canola	vacuole	22.87	22.26
CDX91593	Canola	vacuole	22.87	22.26
CDX71355	Canola	endoplasmic reticulum, vacuole	23.78	21.67
CDY24324	Canola	endoplasmic reticulum, vacuole	23.48	21.51

Protein Annotations

EnsemblPlants:CDX74229	EnsemblPlantsGene:GSBRNA2T00112010001	InterPro:EXORDIUM-like	PANTHER:PTHR31279	PANTHER:PTHR31279:SF13	PFAM:PF04674
ProteinID:CDX74229	ProteinID:CDX74229.1	SEG:seg	SignalP:SignalP-noTM	UniParc:UPI0004EE8A97	MapMan:35.1

Description

BnaA03g28180D

Coordinates

chrLK031800:+:1885530..1886628

Molecular Weight (calculated)

36195.3 Da

IEP (calculated)

8.051

GRAVY (calculated)

-0.197

Length

328 amino acids

Sequence
(BLAST)

001: MASSSSSSSL FVITFLLFSP LCFSRESPSQ IPDGTLNLSL LWYGQFTPVQ KERVRDFIES LNFDAKEGLD PKVSAWWKVV EGYQERYEVK EIYRQKSSSR
101: TVAPKIKVKV VRSYVDEKMM FGKDLTIDNG EKLVETAVGN MSKVVPVVLL SSQVRAHHVG FCNGTCQEYG LTIKSNIKGQ EKKQPYVMVS DPEVQCPGEC
201: AWPFHIANKG PHGMTYQPPS GEIGADALII QLATGLADVA TNPAITESLF KSEAPYSTDG NHTSSIYIVD PATKCFRVFG SGAFPGFTGR IRVDPLTGGA
301: FNSHGINHLK FLIPSIWDPK TKSCYTPM

Best Arabidopsis Sequence Match ( AT3G02970.1 )
(BLAST)

001: MAMASASSSS SSISVIIFLL LAPLCLSREP PSQIPNGTLD LSLLWYGQFT PTQKERVHDF IESLNFDAKE GLDPKVSAWW KVVESYQERF EVKDIYRQKK
101: SNRTVAPRIK VKVVRSYVDE KMKYGKELTM GNGEKLVETA IGNMSKVVPV VLLSAQVRAH GVGFCDGTCQ HNALAKIKGQ KEPRRYIMVS NPEVECPGEC
201: AWPFHTADKG PRGMTYQPAS GEVGADALVI QLATGLADLA TNPDLTKSLF KSETTPYNDD VKKNHESSSM YIVDPATKCT RVFGSGAFPG FTGRIRVDPI
301: TGGAFNSHGI NHLKFLIPSI WDPKTKSCWT PM

Arabidopsis Description

EXL6Protein EXORDIUM-like 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8T8]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.