CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 6
golgi 5
plasma membrane 5
endoplasmic reticulum 6
vacuole 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001070.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	99.39	99.39
CDX74229	Canola	endoplasmic reticulum, extracellular, vacuole	98.47	98.17
AT3G02970.1	Thale cress	endoplasmic reticulum, extracellular, golgi	81.04	79.82
CDY28728	Canola	mitochondrion	80.12	63.75
CDY43160	Canola	cytosol	79.2	47.44
VIT_16s0039g01800.t01	Wine grape	cytosol	29.97	44.55
CDY40721	Canola	extracellular	17.13	36.84
KRH60707	Soybean	plasma membrane, vacuole	32.42	35.93
KRH51406	Soybean	plasma membrane, vacuole	32.72	35.55
CDY40722	Canola	extracellular	28.44	33.7
CDY44798	Canola	extracellular	27.52	33.21
CDY44799	Canola	extracellular	28.13	32.86
CDY63721	Canola	endoplasmic reticulum, extracellular	30.28	32.57
CDX69904	Canola	endoplasmic reticulum, extracellular	29.36	32.32
CDY21583	Canola	extracellular	29.36	32.32
CDY31329	Canola	endoplasmic reticulum, extracellular	29.97	32.24
CDY43802	Canola	endoplasmic reticulum, extracellular	28.44	30.59
CDX84508	Canola	endoplasmic reticulum, extracellular	28.44	30.59
CDX90701	Canola	endoplasmic reticulum, vacuole	29.05	30.55
CDY05033	Canola	endoplasmic reticulum, vacuole	29.05	30.25
CDY31668	Canola	endoplasmic reticulum, vacuole	24.46	24.92
CDX84257	Canola	extracellular, vacuole	24.46	24.92
CDY46938	Canola	vacuole	22.94	22.26
CDX91593	Canola	vacuole	22.94	22.26
CDX71355	Canola	endoplasmic reticulum, vacuole	23.85	21.67
CDY24324	Canola	endoplasmic reticulum, vacuole	23.55	21.51

Protein Annotations

EnsemblPlants:CDX92021	EnsemblPlantsGene:GSBRNA2T00153679001	InterPro:EXORDIUM-like	PANTHER:PTHR31279	PANTHER:PTHR31279:SF13	PFAM:PF04674
ProteinID:CDX92021	ProteinID:CDX92021.1	SEG:seg	SignalP:SignalP-noTM	UniParc:UPI0004EAEA5E	MapMan:35.1

Description

BnaC03g33230D

Coordinates

chrLK031870:-:1292908..1294005

Molecular Weight (calculated)

36134.3 Da

IEP (calculated)

8.051

GRAVY (calculated)

-0.205

Length

327 amino acids

Sequence
(BLAST)

001: MASSSSSSLF VITFLLFSPL CFSRESPSQI PDGTLNLSLL WYGQFTPVQK ERVRDFIESL NFDAKEGLDP KVSAWWKVVE GYQERYEVKE IYRQKSSSKT
101: VAPRIKVKVV RSYVDEKMMF GKDLTIDNGE KLVETAVGNM SKVVPVVLLS SQVRAHHVGF CNGTCQEYGL TIKSNIKGQE KKQPYVMVSD PEVQCPGECA
201: WPFHIANKGP HGMTYQPPSG EIGADALIIQ LATGLADVAT NPAITESLFK SEPPYSTDGN HTSSIYIVDP ATKCFRVFGS GAFPGFTGRI RVDPLTGGAF
301: NSHGINHLKF LIPSIWDPKT KSCYTPM

Best Arabidopsis Sequence Match ( AT3G02970.1 )
(BLAST)

001: MAMASASSSS SSISVIIFLL LAPLCLSREP PSQIPNGTLD LSLLWYGQFT PTQKERVHDF IESLNFDAKE GLDPKVSAWW KVVESYQERF EVKDIYRQKK
101: SNRTVAPRIK VKVVRSYVDE KMKYGKELTM GNGEKLVETA IGNMSKVVPV VLLSAQVRAH GVGFCDGTCQ HNALAKIKGQ KEPRRYIMVS NPEVECPGEC
201: AWPFHTADKG PRGMTYQPAS GEVGADALVI QLATGLADLA TNPDLTKSLF KSETTPYNDD VKKNHESSSM YIVDPATKCT RVFGSGAFPG FTGRIRVDPI
301: TGGAFNSHGI NHLKFLIPSI WDPKTKSCWT PM

Arabidopsis Description

EXL6Protein EXORDIUM-like 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8T8]
SUBAcon: [extracellular,golgi,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.