Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 6
- golgi 5
- plasma membrane 5
- endoplasmic reticulum 6
- vacuole 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031927.1-P | Field mustard | endoplasmic reticulum, extracellular | 98.36 | 98.36 |
| CDY31329 | Canola | endoplasmic reticulum, extracellular | 98.36 | 98.36 |
| CDX84508 | Canola | endoplasmic reticulum, extracellular | 88.82 | 88.82 |
| CDY43802 | Canola | endoplasmic reticulum, extracellular | 88.82 | 88.82 |
| AT5G64260.1 | Thale cress | extracellular | 87.83 | 87.54 |
| CDX69904 | Canola | endoplasmic reticulum, extracellular | 77.3 | 79.12 |
| CDY21583 | Canola | extracellular | 76.64 | 78.45 |
| CDY40722 | Canola | extracellular | 68.75 | 75.72 |
| CDY44798 | Canola | extracellular | 66.12 | 74.17 |
| KRH18203 | Soybean | nucleus | 71.38 | 71.62 |
| KRH42138 | Soybean | nucleus | 70.07 | 70.07 |
| CDY44799 | Canola | extracellular | 64.14 | 69.64 |
| CDY40721 | Canola | extracellular | 33.88 | 67.76 |
| KRH10561 | Soybean | extracellular | 63.49 | 64.98 |
| VIT_03s0017g01210.t01 | Wine grape | extracellular, vacuole | 65.13 | 64.5 |
| KRH43888 | Soybean | extracellular | 61.84 | 63.73 |
| PGSC0003DMT400079160 | Potato | extracellular, golgi | 63.16 | 62.14 |
| Solyc04g074470.1.1 | Tomato | nucleus | 63.16 | 62.14 |
| GSMUA_Achr3P20420_001 | Banana | endoplasmic reticulum, vacuole | 43.42 | 59.19 |
| GSMUA_Achr6P02120_001 | Banana | endoplasmic reticulum, plasma membrane | 43.09 | 56.96 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, vacuole | 57.89 | 56.77 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, plasma membrane | 55.26 | 55.45 |
| GSMUA_Achr8P14380_001 | Banana | extracellular | 44.74 | 54.4 |
| CDX90701 | Canola | endoplasmic reticulum, vacuole | 54.61 | 53.38 |
| CDY05033 | Canola | endoplasmic reticulum, vacuole | 54.28 | 52.55 |
| Os06t0219900-01 | Rice | extracellular, plasma membrane, vacuole | 53.95 | 52.23 |
| TraesCS7D01G180100.1 | Wheat | endoplasmic reticulum, plasma membrane | 53.29 | 50.94 |
| TraesCS7B01G083900.1 | Wheat | endoplasmic reticulum, vacuole | 53.29 | 50.94 |
| TraesCS7A01G178200.1 | Wheat | endoplasmic reticulum, vacuole | 53.29 | 50.78 |
| HORVU7Hr1G036710.2 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 51.97 | 49.69 |
| Zm00001d037204_P001 | Maize | golgi, mitochondrion | 52.96 | 49.24 |
| KXG19617 | Sorghum | golgi, mitochondrion, vacuole | 52.96 | 49.09 |
| Zm00001d052799_P001 | Maize | endoplasmic reticulum, extracellular | 49.34 | 48.86 |
| OQU81032 | Sorghum | extracellular | 50.66 | 48.73 |
| CDY31668 | Canola | endoplasmic reticulum, vacuole | 34.21 | 32.4 |
| CDX84257 | Canola | extracellular, vacuole | 32.89 | 31.15 |
| CDX92021 | Canola | endoplasmic reticulum, extracellular, vacuole | 32.57 | 30.28 |
| CDY46938 | Canola | vacuole | 33.22 | 29.97 |
| CDX91593 | Canola | vacuole | 33.22 | 29.97 |
| CDX74229 | Canola | endoplasmic reticulum, extracellular, vacuole | 31.91 | 29.57 |
| CDX71355 | Canola | endoplasmic reticulum, vacuole | 33.22 | 28.06 |
| CDY24324 | Canola | endoplasmic reticulum, vacuole | 32.89 | 27.93 |
| CDY28728 | Canola | mitochondrion | 32.57 | 24.09 |
| CDY43160 | Canola | cytosol | 32.57 | 18.13 |
Protein Annotations
| EnsemblPlants:CDY63721 | EnsemblPlantsGene:GSBRNA2T00039577001 | InterPro:EXORDIUM-like | PANTHER:PTHR31279 | PANTHER:PTHR31279:SF12 | PFAM:PF04674 |
| ProteinID:CDY63721 | ProteinID:CDY63721.1 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EE1B7A | UniProt:A0A078JFA9 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC02g48820DBnaC02g48820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JFA9]
Coordinates
chrLK034343:-:8788..9918
Molecular Weight (calculated)
32420.1 Da
IEP (calculated)
9.864
GRAVY (calculated)
0.014
Length
304 amino acids
Sequence
(BLAST)
(BLAST)
001: MAYNYRFAFF LTVLTAIAGI SSAALVKEQP LVLKYHNGAL LKGNINVNLV WYGKFTPTQR SVIVDFIRSL NSKEAATSAA PSVASWWKTT EKYKGGASTL
101: VVGKQLLLEN YPLGKSLKNP NLRALSTKLN GGLRSITVVL TAKDVSVEGF CMNRCGSHGS TVSTSRRAAN GPAYVWVGNA ETMCPGYCAW PFHQPIYGPQ
201: GPPLVSPNGD VGVDGMIINL ATLLANTVTN PFKNGYYQGP PTAPLEAVSA CTGMFGSGSY PGYAGLVLVD KTTGSSYNAR GLAGRKYLLP AMWDPQTSTC
301: KTLV
101: VVGKQLLLEN YPLGKSLKNP NLRALSTKLN GGLRSITVVL TAKDVSVEGF CMNRCGSHGS TVSTSRRAAN GPAYVWVGNA ETMCPGYCAW PFHQPIYGPQ
201: GPPLVSPNGD VGVDGMIINL ATLLANTVTN PFKNGYYQGP PTAPLEAVSA CTGMFGSGSY PGYAGLVLVD KTTGSSYNAR GLAGRKYLLP AMWDPQTSTC
301: KTLV
001: MASNYRFAIF LTLFFATAGF SAAALVEEQP LVMKYHNGVL LKGNITVNLV WYGKFTPIQR SVIVDFIHSL NSKDVASSAA VPSVASWWKT TEKYKGGSST
101: LVVGKQLLLE NYPLGKSLKN PYLRALSTKL NGGLRSITVV LTAKDVTVER FCMSRCGTHG SSGSNPRRAA NGAAYVWVGN SETQCPGYCA WPFHQPIYGP
201: QTPPLVAPNG DVGVDGMIIN LATLLANTVT NPFNNGYYQG PPTAPLEAVS ACPGIFGSGS YPGYAGRVLV DKTTGSSYNA RGLAGRKYLL PAMWDPQSST
301: CKTLV
101: LVVGKQLLLE NYPLGKSLKN PYLRALSTKL NGGLRSITVV LTAKDVTVER FCMSRCGTHG SSGSNPRRAA NGAAYVWVGN SETQCPGYCA WPFHQPIYGP
201: QTPPLVAPNG DVGVDGMIIN LATLLANTVT NPFNNGYYQG PPTAPLEAVS ACPGIFGSGS YPGYAGRVLV DKTTGSSYNA RGLAGRKYLL PAMWDPQSST
301: CKTLV
Arabidopsis Description
EXL2Protein EXORDIUM-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE06]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.