CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31668	Canola	endoplasmic reticulum, vacuole	96.26	96.26
AT2G35150.1	Thale cress	extracellular	86.29	85.76
VIT_01s0011g01920.t01	Wine grape	vacuole	63.55	61.08
GSMUA_Achr11P...	Banana	cytosol, extracellular, plastid	52.65	58.48
PGSC0003DMT400093900	Potato	mitochondrion	61.37	58.28
CDX91593	Canola	vacuole	51.71	49.26
CDY46938	Canola	vacuole	51.71	49.26
TraesCS2B01G237800.1	Wheat	extracellular, plasma membrane	50.47	48.94
TraesCS2A01G212700.1	Wheat	extracellular	50.16	48.64
CDY24324	Canola	endoplasmic reticulum, vacuole	53.89	48.32
Os07t0496700-01	Rice	extracellular	49.22	48.32
CDX71355	Canola	endoplasmic reticulum, vacuole	53.89	48.06
TraesCS2D01G218500.1	Wheat	extracellular	49.53	48.04
EER99411	Sorghum	vacuole	51.09	47.95
Zm00001d021544_P001	Maize	extracellular, vacuole	49.84	47.2
HORVU2Hr1G049410.1	Barley	extracellular, peroxisome	50.47	42.86
GSMUA_Achr10P...	Banana	nucleus	36.14	36.94
CDX90701	Canola	endoplasmic reticulum, vacuole	32.09	33.12
CDY31329	Canola	endoplasmic reticulum, extracellular	31.15	32.89
CDY63721	Canola	endoplasmic reticulum, extracellular	31.15	32.89
CDX84508	Canola	endoplasmic reticulum, extracellular	31.15	32.89
CDY05033	Canola	endoplasmic reticulum, vacuole	32.09	32.8
CDY43802	Canola	endoplasmic reticulum, extracellular	30.84	32.57
CDY44798	Canola	extracellular	26.79	31.73
CDX69904	Canola	endoplasmic reticulum, extracellular	28.97	31.31
CDY21583	Canola	extracellular	28.97	31.31
CDY44799	Canola	extracellular	26.48	30.36
CDY40721	Canola	extracellular	14.33	30.26
CDY40722	Canola	extracellular	25.86	30.07
CDX92021	Canola	endoplasmic reticulum, extracellular, vacuole	24.92	24.46
CDX74229	Canola	endoplasmic reticulum, extracellular, vacuole	24.92	24.39
CDY28728	Canola	mitochondrion	23.68	18.49
CDY43160	Canola	cytosol	23.36	13.74

Protein Annotations

EnsemblPlants:CDX84257	EnsemblPlantsGene:GSBRNA2T00141336001	InterPro:EXORDIUM-like	PANTHER:PTHR31279	PANTHER:PTHR31279:SF18	PFAM:PF04674
ProteinID:CDX84257	ProteinID:CDX84257.1	SEG:seg	SignalP:SignalP-noTM	UniParc:UPI0004EB391D	MapMan:35.1

Description

BnaC04g10190D

Coordinates

chrLK031836:+:1222371..1223336

Molecular Weight (calculated)

36125.9 Da

IEP (calculated)

6.773

GRAVY (calculated)

-0.166

Length

321 amino acids

Sequence
(BLAST)

001: MISLIFLFFL SLSFTSDGQL YDESKNYEGS SDLVNLEYHM GPVISSPETS LYIIWYGRWN PTHQSTIRDF IYSVSSPARY PSVFDWWKTV RLYRDQTGSN
101: ITRTLVLSGE FHDSTYSHGS QLSRFSVQSI IRTAVANKLP LNSLNGLYMV LTSDDVEMQE FCRAICGFHY FTFSTIVGAT VPYVWVGNSR KQCPEMCAYP
201: FAQPKPFPGS GFVSREKMKP PNGEVGIDGM ISVIAHELAE VSSNPMLNGW YGGEDAMAPT EIADLCLGVY GSGGGGGYMG IVYKDRWRSV YNVNGVGRRK
301: YLIQWVWDLT RNRCFGPNAM N

Best Arabidopsis Sequence Match ( AT2G35150.1 )
(BLAST)

001: MSLIIVFFFF SLLLTSNGQF FDESKNYEGS SDLVDLQYHL GPVISSPVTS LYIIWYGRWN PTHQSIIRDF LYSVSAPAPA QYPSVSNWWK TVRLYRDQTG
101: SNITDTLVLS GEFHDSTYSH GSHLTRFSVQ SVIRTALTSK LPLNAVNGLY LVLTSDDVEM QEFCRAICGF HYFTFPSVVG ATVPYAWVGN SERQCPEMCA
201: YPFAQPKPFP GSGFVAREKM KPPNGEVGID GMISVIAHEL AEVSSNPMLN GWYGGEDATA PTEIADLCLG VYGSGGGGGY MGSVYKDRWR NVYNVKGVKG
301: RKYLIQWVWD LNRNRCFGPN AMN

Arabidopsis Description

EXL7EXL7 [Source:UniProtKB/TrEMBL;Acc:A0A178VYH7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.