Factsheet for VIT_01s0011g01920.t01

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 8
plasma membrane 5
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400093900	Potato	mitochondrion	74.55	73.67
GSMUA_Achr11P...	Banana	cytosol, extracellular, plastid	62.28	71.97
Bra005364.1-P	Field mustard	endoplasmic reticulum, vacuole	61.08	63.55
CDX84257	Canola	extracellular, vacuole	61.08	63.55
CDY31668	Canola	endoplasmic reticulum, vacuole	61.08	63.55
AT2G35150.1	Thale cress	extracellular	60.78	62.85
Os07t0496700-01	Rice	extracellular	57.19	58.41
TraesCS2A01G212700.1	Wheat	extracellular	56.59	57.1
Zm00001d021544_P001	Maize	extracellular, vacuole	57.78	56.93
TraesCS2B01G237800.1	Wheat	extracellular, plasma membrane	56.29	56.8
TraesCS2D01G218500.1	Wheat	extracellular	56.29	56.8
EER99411	Sorghum	vacuole	57.19	55.85
VIT_03s0038g03860.t01	Wine grape	extracellular	57.19	55.52
VIT_16s0022g01430.t01	Wine grape	extracellular, golgi	55.69	53.45
HORVU2Hr1G049410.1	Barley	extracellular, peroxisome	56.29	49.74
GSMUA_Achr10P...	Banana	nucleus	41.02	43.63
VIT_03s0017g01210.t01	Wine grape	extracellular, vacuole	33.83	36.81
VIT_18s0001g06150.t01	Wine grape	vacuole	33.83	35.42
VIT_18s0001g06030.t01	Wine grape	extracellular, plasma membrane	31.14	34.55
VIT_07s0005g00870.t01	Wine grape	extracellular, plasma membrane	33.23	34.37
VIT_18s0001g06170.t01	Wine grape	endoplasmic reticulum, vacuole	32.04	33.65
VIT_18s0001g06140.t01	Wine grape	endoplasmic reticulum, plasma membrane	31.74	33.54
VIT_18s0001g06020.t01	Wine grape	endoplasmic reticulum, vacuole	31.74	33.33
VIT_16s0039g01800.t01	Wine grape	cytosol	21.26	32.27
VIT_18s0001g06180.t01	Wine grape	plasma membrane, plastid, vacuole	31.74	29.28

Protein Annotations

EntrezGene:100854077	wikigene:100854077	MapMan:35.1	UniProt:A5BPH3	EMBL:AM466568	ProteinID:CAN61638
ProteinID:CAN61638.1	ProteinID:CCB51001	ProteinID:CCB51001.1	InterPro:EXORDIUM-like	EMBL:FN595752	EntrezGene:LOC100854077
wikigene:LOC100854077	PFAM:PF04674	PFscan:PS51257	PANTHER:PTHR31279	PANTHER:PTHR31279:SF18	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI00015217EB	ArrayExpress:VIT_01s0011g01920	EnsemblPlantsGene:VIT_01s0011g01920	EnsemblPlants:VIT_01s0011g01920.t01	unigene:Vvi.23851
RefSeq:XP_003631238	RefSeq:XP_003631238.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1:+:1651392..1652407

Molecular Weight (calculated)

36920.7 Da

IEP (calculated)

7.995

GRAVY (calculated)

-0.123

Length

334 amino acids

Sequence
(BLAST)

001: MQKLHFHLLL LSLSCCFVLA LSWSQSQQFS HAKNYEGSSN LVDLDYHMGP VLASPINLYI IWYGHWNWRH QTTIRDFIYS LSSSSSFPSV ADWWRTVRLY
101: TDQTGSNITG SIVLSGEFYD SRYSQGRYLS RLGIQSVIKK AVTSHPRALP LNPYNGVYLV LSSSDVQVQD FCRAVCGFHY FTFPTIVGVT VPYAWVGYSG
201: TQCPGMCAYP FAWPKYSGRP PPSTNGGNNI MGAPNGDAGV DGMISVIAHE LAEMSSNPLV NAWYAGDDPT APTEIADLCM GVYGSGGGGG YIGNVYKDSW
301: GNGYNVNGVK GRKFLVQWVW NPVKRRCFGP NAMD

Best Arabidopsis Sequence Match ( AT2G35150.1 )
(BLAST)

001: MSLIIVFFFF SLLLTSNGQF FDESKNYEGS SDLVDLQYHL GPVISSPVTS LYIIWYGRWN PTHQSIIRDF LYSVSAPAPA QYPSVSNWWK TVRLYRDQTG
101: SNITDTLVLS GEFHDSTYSH GSHLTRFSVQ SVIRTALTSK LPLNAVNGLY LVLTSDDVEM QEFCRAICGF HYFTFPSVVG ATVPYAWVGN SERQCPEMCA
201: YPFAQPKPFP GSGFVAREKM KPPNGEVGID GMISVIAHEL AEVSSNPMLN GWYGGEDATA PTEIADLCLG VYGSGGGGGY MGSVYKDRWR NVYNVKGVKG
301: RKYLIQWVWD LNRNRCFGPN AMN

Arabidopsis Description

EXL7EXL7 [Source:UniProtKB/TrEMBL;Acc:A0A178VYH7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.