Factsheet for VIT_18s0001g06030.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, plasma membrane

Predictor Summary:

extracellular 6
golgi 5
plasma membrane 7
endoplasmic reticulum 5
vacuole 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0001g06180.t01	Wine grape	plasma membrane, plastid, vacuole	98.01	81.49
KRH72379	Soybean	extracellular, vacuole	69.77	66.46
KRH16767	Soybean	extracellular, vacuole	68.44	65.19
VIT_03s0017g01210.t01	Wine grape	extracellular, vacuole	63.46	62.22
GSMUA_Achr3P20420_001	Banana	endoplasmic reticulum, vacuole	44.85	60.54
GSMUA_Achr6P02120_001	Banana	endoplasmic reticulum, plasma membrane	46.18	60.43
KRH62322	Soybean	nucleus	63.12	60.32
KRH53039	Soybean	extracellular	62.79	59.25
GSMUA_Achr8P14380_001	Banana	extracellular	49.17	59.2
VIT_18s0001g06170.t01	Wine grape	endoplasmic reticulum, vacuole	62.13	58.8
VIT_18s0001g06020.t01	Wine grape	endoplasmic reticulum, vacuole	61.79	58.49
VIT_18s0001g06150.t01	Wine grape	vacuole	61.46	57.99
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, plasma membrane	56.48	56.11
GSMUA_Achr10P...	Banana	endoplasmic reticulum, vacuole	57.48	55.81
VIT_18s0001g06140.t01	Wine grape	endoplasmic reticulum, plasma membrane	56.81	54.11
OQU81032	Sorghum	extracellular	53.16	50.63
Zm00001d052799_P001	Maize	endoplasmic reticulum, extracellular	50.5	49.51
Zm00001d037204_P001	Maize	golgi, mitochondrion	53.49	49.24
TraesCS7D01G180100.1	Wheat	endoplasmic reticulum, plasma membrane	51.83	49.06
TraesCS7A01G178200.1	Wheat	endoplasmic reticulum, vacuole	51.83	48.9
HORVU7Hr1G036710.2	Barley	endoplasmic reticulum, extracellular, plasma membrane	51.49	48.74
Os06t0219900-01	Rice	extracellular, plasma membrane, vacuole	50.83	48.73
KXG19617	Sorghum	golgi, mitochondrion, vacuole	52.82	48.48
TraesCS7B01G083900.1	Wheat	endoplasmic reticulum, vacuole	51.16	48.43
VIT_16s0039g01800.t01	Wine grape	cytosol	31.56	43.18
VIT_07s0005g00870.t01	Wine grape	extracellular, plasma membrane	45.51	42.41
VIT_16s0022g01430.t01	Wine grape	extracellular, golgi	36.21	31.32
VIT_01s0011g01920.t01	Wine grape	vacuole	34.55	31.14
VIT_03s0038g03860.t01	Wine grape	extracellular	32.56	28.49

Protein Annotations

EntrezGene:100260784	wikigene:100260784	MapMan:35.1	ProteinID:CCB45582	ProteinID:CCB45582.1	InterPro:EXORDIUM-like
UniProt:F6H0R3	EMBL:FN595227	EntrezGene:LOC100260784	wikigene:LOC100260784	PFAM:PF04674	PANTHER:PTHR31279
PANTHER:PTHR31279:SF8	SignalP:SignalP-noTM	UniParc:UPI00015C7E7C	ArrayExpress:VIT_18s0001g06030	EnsemblPlantsGene:VIT_18s0001g06030	EnsemblPlants:VIT_18s0001g06030.t01
unigene:Vvi.25395	RefSeq:XP_002285775	RefSeq:XP_002285775.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr18:+:4597940..4599044

Molecular Weight (calculated)

32449.6 Da

IEP (calculated)

6.764

GRAVY (calculated)

0.009

Length

301 amino acids

Sequence
(BLAST)

001: MTSTYHFSIF VSLLLLSCLP NLTSATPRKL FSLVQEQPLI LKYHNGPLLK GNITLNLVWY GNFSPIQRSI LVDFLQSLNS HTTTPHSVSS WWQTIQKYKG
101: VSCTLAVGNQ ILDEDYSLGK SLRSSDIISL ASRSNQRSEI TVVFTSADVA VEGFFMSRCG THGSTQSKWA YAWVGNSETQ CPGQCAWPLH QPMYGPQTPP
201: LVSPNGDVGI DGMVINLATV LAGTVTNPFD NGYFQGSASA PLEAVTACTG IFGTGAYPGY PGEVLADGTT GASYNAVGVD GRKYLLPAMW DPQTSTCKTL
301: V

Best Arabidopsis Sequence Match ( AT5G64260.1 )
(BLAST)

001: MASNYRFAIF LTLFFATAGF SAAALVEEQP LVMKYHNGVL LKGNITVNLV WYGKFTPIQR SVIVDFIHSL NSKDVASSAA VPSVASWWKT TEKYKGGSST
101: LVVGKQLLLE NYPLGKSLKN PYLRALSTKL NGGLRSITVV LTAKDVTVER FCMSRCGTHG SSGSNPRRAA NGAAYVWVGN SETQCPGYCA WPFHQPIYGP
201: QTPPLVAPNG DVGVDGMIIN LATLLANTVT NPFNNGYYQG PPTAPLEAVS ACPGIFGSGS YPGYAGRVLV DKTTGSSYNA RGLAGRKYLL PAMWDPQSST
301: CKTLV

Arabidopsis Description

EXL2Protein EXORDIUM-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE06]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.