Factsheet for Os06t0219900-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 7
golgi 5
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	nucleus, plasma membrane, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0565000-01
Os04t0445600-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G64260.1	Os02t0565000-01	AT1G54060.1	21798944
AT5G64260.1	Os04t0445600-00	AT1G54060.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G178200.1	Wheat	endoplasmic reticulum, vacuole	79.3	78.06
TraesCS7D01G180100.1	Wheat	endoplasmic reticulum, plasma membrane	78.03	77.04
HORVU7Hr1G036710.2	Barley	endoplasmic reticulum, extracellular, plasma membrane	77.71	76.73
TraesCS7B01G083900.1	Wheat	endoplasmic reticulum, vacuole	76.75	75.79
KXG19617	Sorghum	golgi, mitochondrion, vacuole	78.03	74.7
Zm00001d037204_P001	Maize	golgi, mitochondrion	76.75	73.7
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, plasma membrane	59.87	62.05
GSMUA_Achr10P...	Banana	endoplasmic reticulum, vacuole	60.83	61.61
Solyc04g074460.1.1	Tomato	cytosol, plastid	17.83	60.87
Os06t0220000-01	Rice	extracellular	50.96	56.54
KRH18203	Soybean	nucleus	52.23	54.13
CDY63721	Canola	endoplasmic reticulum, extracellular	52.23	53.95
CDY40722	Canola	extracellular	47.13	53.62
CDY31329	Canola	endoplasmic reticulum, extracellular	51.91	53.62
Bra031927.1-P	Field mustard	endoplasmic reticulum, extracellular	51.91	53.62
CDX84508	Canola	endoplasmic reticulum, extracellular	51.59	53.29
CDX69904	Canola	endoplasmic reticulum, extracellular	50.32	53.2
AT5G64260.1	Thale cress	extracellular	51.59	53.11
CDY43802	Canola	endoplasmic reticulum, extracellular	51.27	52.96
KRH42138	Soybean	nucleus	51.27	52.96
Bra024280.1-P	Field mustard	endoplasmic reticulum, extracellular	51.27	52.96
AT5G09440.1	Thale cress	extracellular	46.82	52.88
Bra009384.1-P	Field mustard	endoplasmic reticulum, extracellular	50.0	52.86
Solyc01g105410.2.1	Tomato	endoplasmic reticulum	50.64	52.82
VIT_03s0017g01210.t01	Wine grape	extracellular, vacuole	51.59	52.77
CDY44798	Canola	extracellular	45.54	52.77
PGSC0003DMT400079160	Potato	extracellular, golgi	51.91	52.75
KRH62322	Soybean	nucleus	52.87	52.7
KRH43888	Soybean	extracellular	49.36	52.54
KRH16767	Soybean	extracellular, vacuole	52.87	52.53
CDY21583	Canola	extracellular	49.68	52.53
Solyc04g074470.1.1	Tomato	nucleus	51.27	52.1
Os02t0757100-01	Rice	extracellular	51.59	52.09
KRH72379	Soybean	extracellular, vacuole	52.23	51.9
KRH10561	Soybean	extracellular	49.04	51.85
PGSC0003DMT400032756	Potato	extracellular	49.68	51.83
KRH53039	Soybean	extracellular	52.55	51.72
Os02t0756600-01	Rice	extracellular	51.27	51.44
VIT_18s0001g06030.t01	Wine grape	extracellular, plasma membrane	48.73	50.83
Bra028635.1-P	Field mustard	extracellular	47.45	50.51
Os02t0756200-02	Rice	extracellular	48.73	49.68
Os02t0756800-01	Rice	extracellular	51.59	49.39
CDY40721	Canola	extracellular	23.57	48.68
CDY44799	Canola	extracellular	42.04	47.14
Os06t0220200-00	Rice	endoplasmic reticulum, extracellular, vacuole	48.09	47.04
Bra028634.1-P	Field mustard	extracellular	45.22	47.02
Os10t0376400-00	Rice	extracellular, plasma membrane	46.82	44.01
Os06t0220300-00	Rice	extracellular	44.27	43.99
VIT_18s0001g06180.t01	Wine grape	plasma membrane, plastid, vacuole	49.04	42.54
Os07t0496700-01	Rice	extracellular	33.76	32.42
Os06t0133600-01	Rice	golgi, vacuole	34.71	31.32

Protein Annotations

EMBL:AK058704	EnsemblPlants:Os06t0219900-01	EnsemblPlantsGene:Os06g0219900	EntrezGene:4340512	InterPro:EXORDIUM-like	PANTHER:PTHR31279
PANTHER:PTHR31279:SF19	PFAM:PF04674	ProteinID:BAD37241.1	ProteinID:BAF19080.1	ProteinID:BAS96820.1	RefSeq:XP_015644022.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0000426200	UniProt:Q67X78	MapMan:35.1	:

Description

Similar to Phi-1 protein. (Os06t0219900-01)

Coordinates

chr6:-:6177896..6179163

Molecular Weight (calculated)

32751.8 Da

IEP (calculated)

9.512

GRAVY (calculated)

0.208

Length

314 amino acids

Sequence
(BLAST)

001: MAERVTKALM RPLLCYIIVV AVAPAGCAAF NPRMLFLVKP DPIVLKDHHG VVLSGNVTVN VLYYGRFTPA QRAVVAGFVR SASAAQHPRV PSVAAWWSTT
101: SLYRGGGARL RLGMQVMDER MSLGRSLSLD NVTALTRAAG HHRGAVTAVL TAPDVLVAPF CMSRCGVHGH GGGVGAHGRA RYAYLWAGNP AQQCPGQCAW
201: PFHQPVYGPQ APPLVPPNGD VGVDGMVISL AALLAGTVTN PFGDGYYQGD AGAGMEAATA CAGVFGSGAF PGYPGKLLKD PVTGASYNAV GLAGRKYLLP
301: ALWDPTTSQC KTLV

Best Arabidopsis Sequence Match ( AT5G64260.1 )
(BLAST)

001: MASNYRFAIF LTLFFATAGF SAAALVEEQP LVMKYHNGVL LKGNITVNLV WYGKFTPIQR SVIVDFIHSL NSKDVASSAA VPSVASWWKT TEKYKGGSST
101: LVVGKQLLLE NYPLGKSLKN PYLRALSTKL NGGLRSITVV LTAKDVTVER FCMSRCGTHG SSGSNPRRAA NGAAYVWVGN SETQCPGYCA WPFHQPIYGP
201: QTPPLVAPNG DVGVDGMIIN LATLLANTVT NPFNNGYYQG PPTAPLEAVS ACPGIFGSGS YPGYAGRVLV DKTTGSSYNA RGLAGRKYLL PAMWDPQSST
301: CKTLV

Arabidopsis Description

EXL2Protein EXORDIUM-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE06]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.