Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69904 | Canola | endoplasmic reticulum, extracellular | 97.64 | 97.64 |
| Bra009384.1-P | Field mustard | endoplasmic reticulum, extracellular | 97.31 | 97.31 |
| AT5G09440.1 | Thale cress | extracellular | 77.78 | 83.09 |
| CDY40722 | Canola | extracellular | 75.76 | 81.52 |
| CDY44798 | Canola | extracellular | 72.73 | 79.7 |
| CDY43802 | Canola | endoplasmic reticulum, extracellular | 78.79 | 76.97 |
| CDX84508 | Canola | endoplasmic reticulum, extracellular | 78.79 | 76.97 |
| CDY63721 | Canola | endoplasmic reticulum, extracellular | 78.45 | 76.64 |
| CDY31329 | Canola | endoplasmic reticulum, extracellular | 78.45 | 76.64 |
| CDY44799 | Canola | extracellular | 71.72 | 76.07 |
| CDY40721 | Canola | extracellular | 37.04 | 72.37 |
| KRH18203 | Soybean | nucleus | 69.02 | 67.66 |
| KRH42138 | Soybean | nucleus | 68.01 | 66.45 |
| VIT_03s0017g01210.t01 | Wine grape | extracellular, vacuole | 65.99 | 63.84 |
| KRH43888 | Soybean | extracellular | 62.29 | 62.71 |
| KRH10561 | Soybean | extracellular | 62.29 | 62.29 |
| Solyc04g074470.1.1 | Tomato | nucleus | 64.31 | 61.81 |
| PGSC0003DMT400079160 | Potato | extracellular, golgi | 63.64 | 61.16 |
| GSMUA_Achr3P20420_001 | Banana | endoplasmic reticulum, vacuole | 45.79 | 60.99 |
| GSMUA_Achr6P02120_001 | Banana | endoplasmic reticulum, plasma membrane | 45.79 | 59.13 |
| GSMUA_Achr8P14380_001 | Banana | extracellular | 47.81 | 56.8 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, vacuole | 56.9 | 54.52 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, plasma membrane | 54.55 | 53.47 |
| CDX90701 | Canola | endoplasmic reticulum, vacuole | 53.54 | 51.13 |
| CDY05033 | Canola | endoplasmic reticulum, vacuole | 52.86 | 50.0 |
| Os06t0219900-01 | Rice | extracellular, plasma membrane, vacuole | 52.53 | 49.68 |
| TraesCS7D01G180100.1 | Wheat | endoplasmic reticulum, plasma membrane | 51.85 | 48.43 |
| TraesCS7B01G083900.1 | Wheat | endoplasmic reticulum, vacuole | 51.85 | 48.43 |
| TraesCS7A01G178200.1 | Wheat | endoplasmic reticulum, vacuole | 51.85 | 48.28 |
| Zm00001d037204_P001 | Maize | golgi, mitochondrion | 52.86 | 48.01 |
| HORVU7Hr1G036710.2 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 50.84 | 47.48 |
| KXG19617 | Sorghum | golgi, mitochondrion, vacuole | 51.52 | 46.65 |
| Zm00001d052799_P001 | Maize | endoplasmic reticulum, extracellular | 47.47 | 45.93 |
| OQU81032 | Sorghum | extracellular | 48.48 | 45.57 |
| CDY31668 | Canola | endoplasmic reticulum, vacuole | 32.32 | 29.91 |
| CDX92021 | Canola | endoplasmic reticulum, extracellular, vacuole | 32.32 | 29.36 |
| CDX84257 | Canola | extracellular, vacuole | 31.31 | 28.97 |
| CDX74229 | Canola | endoplasmic reticulum, extracellular, vacuole | 31.99 | 28.96 |
| CDX91593 | Canola | vacuole | 31.99 | 28.19 |
| CDY46938 | Canola | vacuole | 31.99 | 28.19 |
| CDX71355 | Canola | endoplasmic reticulum, vacuole | 31.65 | 26.11 |
| CDY24324 | Canola | endoplasmic reticulum, vacuole | 31.31 | 25.98 |
| CDY28728 | Canola | mitochondrion | 31.99 | 23.11 |
| CDY43160 | Canola | cytosol | 31.65 | 17.22 |
Protein Annotations
| EnsemblPlants:CDY21583 | EnsemblPlantsGene:GSBRNA2T00016047001 | InterPro:EXORDIUM-like | PANTHER:PTHR31279 | PANTHER:PTHR31279:SF12 | PFAM:PF04674 |
| ProteinID:CDY21583 | ProteinID:CDY21583.1 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0001BA88C7 | UniProt:A0A078GA58 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC09g47090DBnaC09g47090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GA58]
Coordinates
chrLK032122:+:351255..352496
Molecular Weight (calculated)
31644.4 Da
IEP (calculated)
9.988
GRAVY (calculated)
0.093
Length
297 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHTHRLAVL LILLSATIGF SSAALVEEQP LVLKYHNGIL LKGNVTLNLV WYGKFTSIQR SIIVDFIRSL SSSAVPSKGP SVASWWKTTE KYKGGSSKIV
101: VGKQLLLENY PLGKSLKSPY LRALSGKLNG GGVRSITVVL TAKDVAVEGF CMNRCGTHGA KARSVNSGAY VWVGNSETQC AGYCAWPFHQ PMYGPQSPPL
201: IAPNGDVGVD GMIINLATLL VNTVTNPFKS GYFNGGNQEA VSVCTGMFGS GSYPGYAGRV LVDKTTGASY NALGLAGRKY LLPAMWDPQT SKCKTLV
101: VGKQLLLENY PLGKSLKSPY LRALSGKLNG GGVRSITVVL TAKDVAVEGF CMNRCGTHGA KARSVNSGAY VWVGNSETQC AGYCAWPFHQ PMYGPQSPPL
201: IAPNGDVGVD GMIINLATLL VNTVTNPFKS GYFNGGNQEA VSVCTGMFGS GSYPGYAGRV LVDKTTGASY NALGLAGRKY LLPAMWDPQT SKCKTLV
001: MAYNYRFAIL LVLLSATVGF TAAALKPPVR TLNGNITLNL IWYGKFTPIQ RSIIVDFIRS ISSVTAAKGP SVASWWKTTE KYKTGVSTLV VGKQLLLENY
101: PLGKSLKSPY LRALSSKLNA GGARSITVVL TAKDVTVEGL CMNRCGTHGS KSSSVNSGAY VWVGNSETQC PGYCAWPFHQ PIYGPQSPPL VAPNGDVGVD
201: GMIINIATLL VNTVTNPSPE AVSACTGIFG SGAYPGYAGR VLVDKTSGAS YNALGLAGRK YLLPALWDPQ TSTCKTMV
101: PLGKSLKSPY LRALSSKLNA GGARSITVVL TAKDVTVEGL CMNRCGTHGS KSSSVNSGAY VWVGNSETQC PGYCAWPFHQ PIYGPQSPPL VAPNGDVGVD
201: GMIINIATLL VNTVTNPSPE AVSACTGIFG SGAYPGYAGR VLVDKTSGAS YNALGLAGRK YLLPALWDPQ TSTCKTMV
Arabidopsis Description
EXL4EXL4 [Source:UniProtKB/TrEMBL;Acc:A0A178UJ96]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.