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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • plastid 2
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular
Any Predictor:plastid, secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d003549_P001
Zm00001d010753_P001
Zm00001d016876_P001
Zm00001d025514_P001
Zm00001d042917_P001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G64260.1 Zm00001d003549_P001 AT1G54060.1 21798944
AT5G64260.1 Zm00001d010753_P001 AT1G54060.1 21798944
AT5G64260.1 Zm00001d016876_P001 AT1G54060.1 21798944
AT5G64260.1 Zm00001d025514_P001 AT1G54060.1 21798944
AT5G64260.1 Zm00001d042917_P001 AT1G54060.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU81032 Sorghum extracellular 87.95 85.44
GSMUA_Achr3P20420_001 Banana endoplasmic reticulum, vacuole 43.97 60.54
GSMUA_Achr8P14380_001 Banana extracellular 48.86 60.0
GSMUA_Achr6P02120_001 Banana endoplasmic reticulum, plasma membrane 42.67 56.96
Solyc04g074460.1.1 Tomato cytosol, plastid 15.96 53.26
Zm00001d037204_P001 Maize golgi, mitochondrion 56.68 53.21
Solyc01g105410.2.1 Tomato endoplasmic reticulum 51.14 52.16
KRH43888 Soybean extracellular 49.84 51.86
PGSC0003DMT400032756 Potato extracellular 50.81 51.83
KRH18203 Soybean nucleus 50.81 51.49
KRH10561 Soybean extracellular 49.51 51.18
VIT_03s0017g01210.t01 Wine grape extracellular, vacuole 50.81 50.81
PGSC0003DMT400079160 Potato extracellular, golgi 51.14 50.81
KRH42138 Soybean nucleus 50.16 50.66
VIT_18s0001g06030.t01 Wine grape extracellular, plasma membrane 49.51 50.5
Solyc04g074470.1.1 Tomato nucleus 50.49 50.16
CDY31329 Canola endoplasmic reticulum, extracellular 49.51 50.0
Bra031927.1-P Field mustard endoplasmic reticulum, extracellular 49.51 50.0
KRH72379 Soybean extracellular, vacuole 51.47 50.0
KRH16767 Soybean extracellular, vacuole 51.14 49.68
CDX84508 Canola endoplasmic reticulum, extracellular 49.19 49.67
KRH62322 Soybean nucleus 50.81 49.52
CDY43802 Canola endoplasmic reticulum, extracellular 48.86 49.34
Bra024280.1-P Field mustard endoplasmic reticulum, extracellular 48.86 49.34
CDY63721 Canola endoplasmic reticulum, extracellular 48.86 49.34
Zm00001d052205_P001 Maize extracellular 50.49 49.21
Zm00001d018107_P001 Maize endoplasmic reticulum, extracellular 50.16 49.04
CDY40722 Canola extracellular 43.97 48.91
KRH53039 Soybean extracellular 50.81 48.9
AT5G64260.1 Thale cress extracellular 48.53 48.85
Zm00001d037205_P001 Maize extracellular 53.42 48.81
AT5G09440.1 Thale cress extracellular 43.65 48.2
CDY44798 Canola extracellular 42.35 47.97
CDX69904 Canola endoplasmic reticulum, extracellular 46.25 47.81
Bra009384.1-P Field mustard endoplasmic reticulum, extracellular 46.25 47.81
Zm00001d044864_P001 Maize mitochondrion 50.81 47.56
CDY21583 Canola extracellular 45.93 47.47
Zm00001d052206_P001 Maize plastid 49.19 46.46
Bra028635.1-P Field mustard extracellular 44.3 46.1
CDY40721 Canola extracellular 22.48 45.39
Zm00001d018105_P001 Maize extracellular 45.93 44.76
Zm00001d014318_P001 Maize extracellular, plasma membrane 47.88 44.68
CDY44799 Canola extracellular 40.39 44.29
Bra028634.1-P Field mustard extracellular 42.67 43.38
VIT_18s0001g06180.t01 Wine grape plasma membrane, plastid, vacuole 50.16 42.54
Zm00001d029777_P001 Maize endoplasmic reticulum, plasma membrane 35.83 32.84
Zm00001d045458_P001 Maize endoplasmic reticulum, extracellular 34.53 31.18
Zm00001d021544_P001 Maize extracellular, vacuole 33.22 30.09
Zm00001d018106_P001 Maize plastid 45.6 23.49
Protein Annotations
EMBL:BT066586EnsemblPlants:Zm00001d052799_P001EnsemblPlants:Zm00001d052799_T001EnsemblPlantsGene:Zm00001d052799EntrezGene:100284458GO:GO:0005575
GO:GO:0016020GO:GO:0016021InterPro:EXORDIUM-likePANTHER:PTHR31279PANTHER:PTHR31279:SF17PFAM:PF04674
ProteinID:AQK58082.1SEG:segSignalP:SignalP-noTMUniParc:UPI000195C9BAUniProt:C0PE67MapMan:35.1
Description
PHI-1
Coordinates
chr4:-:201308914..201309837
Molecular Weight (calculated)
32003.3 Da
IEP (calculated)
8.788
GRAVY (calculated)
0.141
Length
307 amino acids
Sequence
(BLAST)
001: MPHSLFLLVV LLAAAQASAA TPRQLFLVSR PPITLTNHHG QLLTGNYSVN LLWYGRFTPA QRAVVADFIL SLSGTGPGSV AAWWATTSRY HPGAARLSLG
101: RQVLDPSRSL GRRLSESSLA SLATRLAPHR GSVAVVVTAP DVLVDGFCLS RCGLHASSPT PNATRGRGRG RYVYAWVGNP AEQCPGECAW PFHQPLYGPQ
201: PAAAPLVAPN ADVGMDGAVI TLATLLAGAV TNPYGGGFFQ GPAEAPMEAV TACAGVFGAG AYQGYPGQLR VDAATGASYN AVGIAGRRFL LPAMWDPETA
301: QCSTPLD
Best Arabidopsis Sequence Match ( AT5G64260.1 )
(BLAST)
001: MASNYRFAIF LTLFFATAGF SAAALVEEQP LVMKYHNGVL LKGNITVNLV WYGKFTPIQR SVIVDFIHSL NSKDVASSAA VPSVASWWKT TEKYKGGSST
101: LVVGKQLLLE NYPLGKSLKN PYLRALSTKL NGGLRSITVV LTAKDVTVER FCMSRCGTHG SSGSNPRRAA NGAAYVWVGN SETQCPGYCA WPFHQPIYGP
201: QTPPLVAPNG DVGVDGMIIN LATLLANTVT NPFNNGYYQG PPTAPLEAVS ACPGIFGSGS YPGYAGRVLV DKTTGSSYNA RGLAGRKYLL PAMWDPQSST
301: CKTLV
Arabidopsis Description
EXL2Protein EXORDIUM-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE06]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.