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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 6
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
extracellular: 22313117
msms PMID: 22313117 doi
S Lim, K Chisholm, RH Coffin, RD Peters, KI Al-Mughrabi, G Wang-Pruski, DM Pinto
Department of Plant and Animal Sciences, Nova Scotia Agricultural College, Truro, Nova Scotia, Canada.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc01g105410.2.1 Tomato endoplasmic reticulum 97.34 97.34
VIT_03s0017g01210.t01 Wine grape extracellular, vacuole 67.77 66.45
PGSC0003DMT400079160 Potato extracellular, golgi 64.78 63.11
GSMUA_Achr3P20420_001 Banana endoplasmic reticulum, vacuole 43.85 59.19
PGSC0003DMT400079158 Potato endoplasmic reticulum, vacuole 59.8 57.88
PGSC0003DMT400079209 Potato extracellular 60.13 57.83
PGSC0003DMT400079157 Potato endoplasmic reticulum, vacuole 59.47 57.37
GSMUA_Achr6P02120_001 Banana endoplasmic reticulum, plasma membrane 43.52 56.96
PGSC0003DMT400079207 Potato endoplasmic reticulum, vacuole 59.8 56.6
GSMUA_Achr10P... Banana endoplasmic reticulum, vacuole 58.14 56.45
GSMUA_Achr8P14380_001 Banana extracellular 46.84 56.4
PGSC0003DMT400079208 Potato endoplasmic reticulum, vacuole 59.14 55.97
PGSC0003DMT400079206 Potato endoplasmic reticulum, extracellular 59.14 55.97
PGSC0003DMT400079159 Potato vacuole 58.8 54.97
GSMUA_AchrUn_... Banana endoplasmic reticulum, plasma membrane 54.49 54.13
OQU81032 Sorghum extracellular 54.15 51.58
PGSC0003DMT400079205 Potato endoplasmic reticulum, vacuole 52.82 51.46
Zm00001d052799_P001 Maize endoplasmic reticulum, extracellular 51.83 50.81
KXG19617 Sorghum golgi, mitochondrion, vacuole 55.15 50.61
Os06t0219900-01 Rice extracellular, plasma membrane, vacuole 51.83 49.68
HORVU7Hr1G036710.2 Barley endoplasmic reticulum, extracellular, plasma membrane 52.16 49.37
TraesCS7D01G180100.1 Wheat endoplasmic reticulum, plasma membrane 52.16 49.37
TraesCS7A01G178200.1 Wheat endoplasmic reticulum, vacuole 51.83 48.9
TraesCS7B01G083900.1 Wheat endoplasmic reticulum, vacuole 51.49 48.74
Zm00001d037204_P001 Maize golgi, mitochondrion 52.82 48.62
PGSC0003DMT400038389 Potato cytosol 12.29 36.63
PGSC0003DMT400093900 Potato mitochondrion 37.54 33.43
PGSC0003DMT400043340 Potato extracellular 37.87 32.39
PGSC0003DMT400059235 Potato endoplasmic reticulum, plasma membrane 37.21 32.09
PGSC0003DMT400072046 Potato extracellular, vacuole 36.21 31.41
PGSC0003DMT400072047 Potato extracellular, vacuole 36.21 31.41
PGSC0003DMT400089791 Potato cytosol 11.3 24.82
PGSC0003DMT400095305 Potato cytosol 8.31 20.33
Protein Annotations
EMBL:AY262021EnsemblPlants:PGSC0003DMT400032756EnsemblPlantsGene:PGSC0003DMG400012577InterPro:EXORDIUM-likePANTHER:PTHR31279PANTHER:PTHR31279:SF12
PFAM:PF04674PGSC:PGSC0003DMG400012577ProteinID:AAP42136ProteinID:AAP42136.1SEG:segSignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI000295C7EEUniProt:M1AXZ2MapMan:35.1::
Description
Erg-1 [Source:PGSC_GENE;Acc:PGSC0003DMG400012577]
Coordinates
chr1:+:82056279..82057487
Molecular Weight (calculated)
31916.2 Da
IEP (calculated)
9.174
GRAVY (calculated)
0.044
Length
301 amino acids
Sequence
(BLAST)
001: MASNYISATV SSILLFLLCS SSLFGASMAA LVQEQPLVLK YHNGALLKGT VTVNLIWYGK FTPSQRSIIV DFLQSLNSPK APNPSAASWW KTTEKYKTGA
101: STVTLGKQIL DENCSLGKSL KNSHIVYLAS KGGYMGRSVN LVLTAKDVFV EGFCSRCGSH GSSRGKVRFT YAWVGNSETQ CAGQCAWPFH QPIYGPQTPP
201: LLAPNGDVGV DGMIINVATV LAGTVTNPFN NGYFQGPATA PLEAVSACTG MFGSGSYPGY PGQTLVDKST GASYNAHGVN GRRFLLPAMW DPTKSACSAL
301: V
Best Arabidopsis Sequence Match ( AT5G64260.1 )
(BLAST)
001: MASNYRFAIF LTLFFATAGF SAAALVEEQP LVMKYHNGVL LKGNITVNLV WYGKFTPIQR SVIVDFIHSL NSKDVASSAA VPSVASWWKT TEKYKGGSST
101: LVVGKQLLLE NYPLGKSLKN PYLRALSTKL NGGLRSITVV LTAKDVTVER FCMSRCGTHG SSGSNPRRAA NGAAYVWVGN SETQCPGYCA WPFHQPIYGP
201: QTPPLVAPNG DVGVDGMIIN LATLLANTVT NPFNNGYYQG PPTAPLEAVS ACPGIFGSGS YPGYAGRVLV DKTTGSSYNA RGLAGRKYLL PAMWDPQSST
301: CKTLV
Arabidopsis Description
EXL2Protein EXORDIUM-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE06]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.