Factsheet for TraesCS7D01G180100.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 5
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G313300.1
TraesCS2B01G332100.1
TraesCS2D01G311800.1
TraesCS6A01G198600.1
TraesCS6B01G230000.1
TraesCS6D01G184500.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G64260.1	TraesCS2A01G313300.1	AT1G54060.1	21798944
AT5G64260.1	TraesCS2B01G332100.1	AT1G54060.1	21798944
AT5G64260.1	TraesCS2D01G311800.1	AT1G54060.1	21798944
AT5G64260.1	TraesCS6A01G198600.1	AT1G54060.1	21798944
AT5G64260.1	TraesCS6B01G230000.1	AT1G54060.1	21798944
AT5G64260.1	TraesCS6D01G184500.2	AT1G54060.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G178200.1	Wheat	endoplasmic reticulum, vacuole	98.11	97.81
TraesCS7B01G083900.1	Wheat	endoplasmic reticulum, vacuole	96.54	96.54
HORVU7Hr1G036710.2	Barley	endoplasmic reticulum, extracellular, plasma membrane	94.03	94.03
Os06t0219900-01	Rice	extracellular, plasma membrane, vacuole	77.04	78.03
KXG19617	Sorghum	golgi, mitochondrion, vacuole	78.3	75.91
Zm00001d037204_P001	Maize	golgi, mitochondrion	77.04	74.92
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, plasma membrane	60.69	63.7
GSMUA_Achr10P...	Banana	endoplasmic reticulum, vacuole	61.32	62.9
Solyc04g074460.1.1	Tomato	cytosol, plastid	16.67	57.61
KRH43888	Soybean	extracellular	50.94	54.92
KRH18203	Soybean	nucleus	51.57	54.13
CDY44798	Canola	extracellular	45.91	53.87
AT5G09440.1	Thale cress	extracellular	46.86	53.6
CDY31329	Canola	endoplasmic reticulum, extracellular	50.94	53.29
CDY63721	Canola	endoplasmic reticulum, extracellular	50.94	53.29
Bra031927.1-P	Field mustard	endoplasmic reticulum, extracellular	50.94	53.29
CDY40722	Canola	extracellular	45.91	52.9
Solyc01g105410.2.1	Tomato	endoplasmic reticulum	50.0	52.82
KRH42138	Soybean	nucleus	50.31	52.63
KRH10561	Soybean	extracellular	49.06	52.53
AT5G64260.1	Thale cress	extracellular	50.31	52.46
VIT_03s0017g01210.t01	Wine grape	extracellular, vacuole	50.63	52.44
CDX84508	Canola	endoplasmic reticulum, extracellular	50.0	52.3
CDX69904	Canola	endoplasmic reticulum, extracellular	48.74	52.19
Bra009384.1-P	Field mustard	endoplasmic reticulum, extracellular	48.74	52.19
PGSC0003DMT400032756	Potato	extracellular	49.37	52.16
CDY43802	Canola	endoplasmic reticulum, extracellular	49.69	51.97
Bra024280.1-P	Field mustard	endoplasmic reticulum, extracellular	49.69	51.97
CDY21583	Canola	extracellular	48.43	51.85
VIT_18s0001g06030.t01	Wine grape	extracellular, plasma membrane	49.06	51.83
TraesCS6D01G296200.1	Wheat	endoplasmic reticulum	52.52	51.7
KRH62322	Soybean	nucleus	50.94	51.43
KRH16767	Soybean	extracellular, vacuole	50.94	51.27
KRH72379	Soybean	extracellular, vacuole	50.94	51.27
PGSC0003DMT400079160	Potato	extracellular, golgi	49.69	51.13
TraesCS7D01G180600.1	Wheat	extracellular	51.57	51.09
Solyc04g074470.1.1	Tomato	nucleus	49.37	50.81
TraesCS6D01G296100.1	Wheat	endoplasmic reticulum, extracellular	49.69	50.8
TraesCS7D01G180300.1	Wheat	extracellular	50.63	50.31
CDY40721	Canola	extracellular	23.9	50.0
TraesCS7D01G180400.1	Wheat	extracellular	50.31	50.0
TraesCS6D01G296400.1	Wheat	endoplasmic reticulum, extracellular, vacuole	48.74	49.84
Bra028635.1-P	Field mustard	extracellular	46.23	49.83
KRH53039	Soybean	extracellular	49.69	49.53
TraesCS6D01G296300.1	Wheat	extracellular, plasma membrane	49.06	49.52
TraesCS7D01G180500.1	Wheat	extracellular	47.48	48.24
CDY44799	Canola	extracellular	42.14	47.86
Bra028634.1-P	Field mustard	extracellular	44.65	47.02
TraesCS5D01G058000.1	Wheat	extracellular	45.6	44.62
VIT_18s0001g06180.t01	Wine grape	plasma membrane, plastid, vacuole	49.37	43.37
TraesCS7D01G067100.1	Wheat	vacuole	35.22	32.37
TraesCS2D01G218500.1	Wheat	extracellular	33.33	32.02

Protein Annotations

EnsemblPlants:TraesCS7D01G180100.1	EnsemblPlantsGene:TraesCS7D01G180100	InterPro:EXORDIUM-like	PANTHER:PTHR31279	PANTHER:PTHR31279:SF19	PFAM:PF04674
SEG:seg	SignalP:SignalP-noTM	TMHMM:TMhelix	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr7D:-:133320009..133320965

Molecular Weight (calculated)

33323.1 Da

IEP (calculated)

9.180

GRAVY (calculated)

0.094

Length

318 amino acids

Sequence
(BLAST)

001: MGDRKMASLL LLLCLFSLLF AAAPRCAAYS PRTLFLVKPD PIVLRDHGGA LLTGNLTVKV NVLYYGRFAP AQRAVVADFV RSVSAPAPGG GAEPSVASWW
101: RTVSLYRGGG ARLRLGRELL DERMSLGRSL SLENVTALAR GAGHHRGAIT AVLTAPDVLV APFCMSRCGV HDHATAGAHG RARYAYLWVG NPAQQCPGQC
201: AWPFHRPSYG PQAPPLVPPS GDVGTDGMVI SLAALLAGTV TNPYGDGYYQ GNDADGAGPE AATACAGIFG SGAYPGYPGR LLVDRATGAS YNAVGLSGRK
301: YLLPALWDPT TSQCRTLV

Best Arabidopsis Sequence Match ( AT5G09440.1 )
(BLAST)

001: MAYNYRFAIL LVLLSATVGF TAAALKPPVR TLNGNITLNL IWYGKFTPIQ RSIIVDFIRS ISSVTAAKGP SVASWWKTTE KYKTGVSTLV VGKQLLLENY
101: PLGKSLKSPY LRALSSKLNA GGARSITVVL TAKDVTVEGL CMNRCGTHGS KSSSVNSGAY VWVGNSETQC PGYCAWPFHQ PIYGPQSPPL VAPNGDVGVD
201: GMIINIATLL VNTVTNPSPE AVSACTGIFG SGAYPGYAGR VLVDKTSGAS YNALGLAGRK YLLPALWDPQ TSTCKTMV

Arabidopsis Description

EXL4EXL4 [Source:UniProtKB/TrEMBL;Acc:A0A178UJ96]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.