Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 6
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plastid:
22908117
nucleus: 28394025 endoplasmic reticulum: 29145071 |
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
msms PMID:
22908117
doi
Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.
msms PMID:
29145071
doi
Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (EEZ-CSIC), Profesor Albareda 1, 18008 Granada, Spain. Electronic address: pablo.ibort@eez.csic.es., Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (EEZ-CSIC), Profesor Albareda 1, 18008 Granada, Spain. Electronic address: raroca@eez.csic.es., United Graduate School of Agricultural Sciences, Iwate University, Morioka, Iwate 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, 3-18-8 Ueda, Morioka, Iwate 020-8550, Japan. Electronic address: u0414004@iwate-u.ac.jp., United Graduate School of Agricultural Sciences, Iwate University, Morioka, Iwate 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, 3-18-8 Ueda, Morioka, Iwate 020-8550, Japan. Electronic address: uemura@iwate-u.ac.jp.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400032756 | Potato | extracellular | 97.34 | 97.34 |
| VIT_03s0017g01210.t01 | Wine grape | extracellular, vacuole | 68.77 | 67.43 |
| Solyc04g074420.1.1 | Tomato | nucleus | 19.27 | 65.17 |
| Solyc04g074470.1.1 | Tomato | nucleus | 65.45 | 63.75 |
| GSMUA_Achr3P20420_001 | Banana | endoplasmic reticulum, vacuole | 44.52 | 60.09 |
| GSMUA_Achr6P02120_001 | Banana | endoplasmic reticulum, plasma membrane | 44.19 | 57.83 |
| GSMUA_Achr8P14380_001 | Banana | extracellular | 47.84 | 57.6 |
| Solyc04g074410.1.1 | Tomato | nucleus | 59.47 | 57.37 |
| Solyc04g074450.1.1 | Tomato | extracellular | 59.8 | 57.32 |
| Solyc04g074440.1.1 | Tomato | nucleus | 59.8 | 57.14 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, vacuole | 57.14 | 55.48 |
| Solyc04g074460.1.1 | Tomato | cytosol, plastid | 16.94 | 55.43 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, plasma membrane | 54.15 | 53.8 |
| Solyc04g074400.1.1 | Tomato | nucleus | 54.15 | 52.75 |
| OQU81032 | Sorghum | extracellular | 54.49 | 51.9 |
| Solyc04g074430.1.1 | Tomato | nucleus | 22.59 | 51.52 |
| KXG19617 | Sorghum | golgi, mitochondrion, vacuole | 55.81 | 51.22 |
| Zm00001d052799_P001 | Maize | endoplasmic reticulum, extracellular | 52.16 | 51.14 |
| Os06t0219900-01 | Rice | extracellular, plasma membrane, vacuole | 52.82 | 50.64 |
| TraesCS7D01G180100.1 | Wheat | endoplasmic reticulum, plasma membrane | 52.82 | 50.0 |
| HORVU7Hr1G036710.2 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 52.82 | 50.0 |
| Zm00001d037204_P001 | Maize | golgi, mitochondrion | 53.82 | 49.54 |
| TraesCS7A01G178200.1 | Wheat | endoplasmic reticulum, vacuole | 52.49 | 49.53 |
| TraesCS7B01G083900.1 | Wheat | endoplasmic reticulum, vacuole | 52.16 | 49.37 |
| Solyc10g074540.1.1 | Tomato | nucleus | 36.54 | 31.98 |
| Solyc03g083560.1.1 | Tomato | nucleus | 36.21 | 31.23 |
| Solyc06g034390.1.1 | Tomato | nucleus | 35.55 | 30.92 |
Protein Annotations
| EnsemblPlants:Solyc01g105410.2.1 | EnsemblPlantsGene:Solyc01g105410.2 | InterPro:EXORDIUM-like | PANTHER:PTHR31279 | PANTHER:PTHR31279:SF12 | PFAM:PF04674 |
| SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0002768F82 | UniProt:K4B2B1 | MapMan:35.1 |
Description
No Description!
Coordinates
chr1:+:93587661..93588898
Molecular Weight (calculated)
31958.3 Da
IEP (calculated)
9.174
GRAVY (calculated)
0.053
Length
301 amino acids
Sequence
(BLAST)
(BLAST)
001: MATNYISATV SSILLFLLCS SSLFGSSMAA LVQEQPLVLK YHNGALLKGT VTVNLVWYGK FTPAQRSIIV DFLQSLNSPK APNPSAASWW KTTEKYKTGA
101: STVTLGKQIL DENCSLGKSL KNSHIVYLAS KGGYMGRSVN LVLTAKDVFV EGFCSRCGSH GSTRGKVRFT YAWVGNSEIQ CAGQCAWPFH QPIYGPQTPP
201: LVAPNGDVGV DGMIINVATV LAGTVTNPFN NGYFQGPATA PLEAVSACTG MFGSGSYPGY PGQTLVDKST GASYNAHGVN GRRFLLPAMW DPTKSACSTL
301: V
101: STVTLGKQIL DENCSLGKSL KNSHIVYLAS KGGYMGRSVN LVLTAKDVFV EGFCSRCGSH GSTRGKVRFT YAWVGNSEIQ CAGQCAWPFH QPIYGPQTPP
201: LVAPNGDVGV DGMIINVATV LAGTVTNPFN NGYFQGPATA PLEAVSACTG MFGSGSYPGY PGQTLVDKST GASYNAHGVN GRRFLLPAMW DPTKSACSTL
301: V
001: MASNYRFAIF LTLFFATAGF SAAALVEEQP LVMKYHNGVL LKGNITVNLV WYGKFTPIQR SVIVDFIHSL NSKDVASSAA VPSVASWWKT TEKYKGGSST
101: LVVGKQLLLE NYPLGKSLKN PYLRALSTKL NGGLRSITVV LTAKDVTVER FCMSRCGTHG SSGSNPRRAA NGAAYVWVGN SETQCPGYCA WPFHQPIYGP
201: QTPPLVAPNG DVGVDGMIIN LATLLANTVT NPFNNGYYQG PPTAPLEAVS ACPGIFGSGS YPGYAGRVLV DKTTGSSYNA RGLAGRKYLL PAMWDPQSST
301: CKTLV
101: LVVGKQLLLE NYPLGKSLKN PYLRALSTKL NGGLRSITVV LTAKDVTVER FCMSRCGTHG SSGSNPRRAA NGAAYVWVGN SETQCPGYCA WPFHQPIYGP
201: QTPPLVAPNG DVGVDGMIIN LATLLANTVT NPFNNGYYQG PPTAPLEAVS ACPGIFGSGS YPGYAGRVLV DKTTGSSYNA RGLAGRKYLL PAMWDPQSST
301: CKTLV
Arabidopsis Description
EXL2Protein EXORDIUM-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE06]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.