Factsheet for GSMUA_Achr10P24670_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 6
plasma membrane 6
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr3P05880_001
GSMUA_Achr8P23650_001
GSMUA_Achr9P14340_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G64260.1	GSMUA_Achr3P05880_001	AT1G54060.1	21798944
AT5G64260.1	GSMUA_Achr8P23650_001	AT1G54060.1	21798944
AT5G64260.1	GSMUA_Achr9P14340_001	AT1G54060.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, plasma membrane	82.58	84.49
GSMUA_Achr3P20420_001	Banana	endoplasmic reticulum, vacuole	49.03	68.16
GSMUA_Achr8P14380_001	Banana	extracellular	54.84	68.0
GSMUA_Achr6P02120_001	Banana	endoplasmic reticulum, plasma membrane	49.03	66.09
TraesCS7D01G180100.1	Wheat	endoplasmic reticulum, plasma membrane	62.9	61.32
Os06t0219900-01	Rice	extracellular, plasma membrane, vacuole	61.61	60.83
TraesCS7A01G178200.1	Wheat	endoplasmic reticulum, vacuole	62.58	60.81
HORVU7Hr1G036710.2	Barley	endoplasmic reticulum, extracellular, plasma membrane	62.26	60.69
TraesCS7B01G083900.1	Wheat	endoplasmic reticulum, vacuole	61.94	60.38
KXG19617	Sorghum	golgi, mitochondrion, vacuole	62.9	59.45
GSMUA_Achr10P...	Banana	cytosol, extracellular, plastid	41.29	58.99
CDX84508	Canola	endoplasmic reticulum, extracellular	57.74	58.88
Bra024280.1-P	Field mustard	endoplasmic reticulum, extracellular	57.42	58.55
CDY43802	Canola	endoplasmic reticulum, extracellular	57.42	58.55
KRH18203	Soybean	nucleus	57.1	58.42
Zm00001d037204_P001	Maize	golgi, mitochondrion	61.61	58.41
KRH43888	Soybean	extracellular	55.48	58.31
KRH10561	Soybean	extracellular	55.81	58.25
PGSC0003DMT400032756	Potato	extracellular	56.45	58.14
AT5G64260.1	Thale cress	extracellular	57.1	58.03
Bra031927.1-P	Field mustard	endoplasmic reticulum, extracellular	56.77	57.89
CDY31329	Canola	endoplasmic reticulum, extracellular	56.77	57.89
CDY63721	Canola	endoplasmic reticulum, extracellular	56.77	57.89
PGSC0003DMT400079160	Potato	extracellular, golgi	57.42	57.61
KRH42138	Soybean	nucleus	56.45	57.57
VIT_18s0001g06030.t01	Wine grape	extracellular, plasma membrane	55.81	57.48
Solyc04g074470.1.1	Tomato	nucleus	57.1	57.28
Solyc01g105410.2.1	Tomato	endoplasmic reticulum	55.48	57.14
Bra009384.1-P	Field mustard	endoplasmic reticulum, extracellular	54.52	56.9
CDX69904	Canola	endoplasmic reticulum, extracellular	54.52	56.9
CDY21583	Canola	extracellular	54.52	56.9
AT5G09440.1	Thale cress	extracellular	50.65	56.47
VIT_03s0017g01210.t01	Wine grape	extracellular, vacuole	55.48	56.03
KRH62322	Soybean	nucleus	56.45	55.56
CDY40722	Canola	extracellular	49.35	55.43
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular	41.29	55.41
KRH72379	Soybean	extracellular, vacuole	56.13	55.06
CDY44798	Canola	extracellular	47.74	54.61
KRH16767	Soybean	extracellular, vacuole	55.48	54.43
KRH53039	Soybean	extracellular	55.81	54.23
Solyc04g074460.1.1	Tomato	cytosol, plastid	15.81	53.26
Bra028635.1-P	Field mustard	extracellular	50.32	52.88
GSMUA_Achr7P12680_001	Banana	endoplasmic reticulum, extracellular	42.9	51.75
CDY40721	Canola	extracellular	24.84	50.66
GSMUA_Achr7P12690_001	Banana	extracellular	32.58	48.56
Bra028634.1-P	Field mustard	extracellular	47.1	48.34
VIT_18s0001g06180.t01	Wine grape	plasma membrane, plastid, vacuole	56.45	48.34
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane	40.0	47.69
GSMUA_Achr8P22420_001	Banana	extracellular, plasma membrane	41.94	46.43
CDY44799	Canola	extracellular	41.94	46.43
GSMUA_Achr8P17620_001	Banana	endoplasmic reticulum, extracellular	35.16	41.92
GSMUA_Achr7P12670_001	Banana	endoplasmic reticulum, extracellular	13.55	37.5
GSMUA_Achr8P13400_001	Banana	extracellular	33.23	37.05
GSMUA_Achr11P...	Banana	extracellular	32.58	36.33
GSMUA_Achr1P16640_001	Banana	vacuole	35.81	33.43
GSMUA_Achr6P30430_001	Banana	endoplasmic reticulum	27.74	32.95
GSMUA_Achr11P...	Banana	cytosol, extracellular, plastid	30.65	32.87
GSMUA_Achr10P...	Banana	nucleus	20.97	20.7

Protein Annotations

EnsemblPlants:GSMUA_Achr10P24670_001	EnsemblPlants:GSMUA_Achr10T24670_001	EnsemblPlantsGene:GSMUA_Achr10G24670_001	InterPro:EXORDIUM-like	PANTHER:PTHR31279	PANTHER:PTHR31279:SF19
PFAM:PF04674	SEG:seg	SignalP:SignalP-noTM	UniParc:UPI00029489BE	UniProt:M0RL42	MapMan:35.1

Description

phosphate-induced protein 1 conserved region domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G24670_001]

Coordinates

chr10:+:29005821..29006960

Molecular Weight (calculated)

32979.1 Da

IEP (calculated)

9.185

GRAVY (calculated)

0.135

Length

310 amino acids

Sequence
(BLAST)

001: MAFSPPPPLL LLLSLLSLLV LQSSAVIPRM LFLVPQQPLV LKYHKGPLLK GNYTVNLLFY GRFTPAQRAI VVDFVRSLSA PARSSRPPSV ASWWGTTALY
101: GPGGATRLSL GRVLLDDRCS LGKSLTDSDL LTLASRAPHR AAITVVLTAP DVLVDGFCMS RCGFHDSGRG GKHGKSRYTY LWVGNPATQC PGECAWPFAQ
201: PTYGPQTPPL LPPNGDVGVD GLIISLATLL ADTVTNPYGD GFFQGPPTLP LEAVTACTGI FGNGAFPGYP GNLLVDPTSG ASYNARGLAG REYLLPAMWD
301: PKTKQCKALV

Best Arabidopsis Sequence Match ( AT5G64260.1 )
(BLAST)

001: MASNYRFAIF LTLFFATAGF SAAALVEEQP LVMKYHNGVL LKGNITVNLV WYGKFTPIQR SVIVDFIHSL NSKDVASSAA VPSVASWWKT TEKYKGGSST
101: LVVGKQLLLE NYPLGKSLKN PYLRALSTKL NGGLRSITVV LTAKDVTVER FCMSRCGTHG SSGSNPRRAA NGAAYVWVGN SETQCPGYCA WPFHQPIYGP
201: QTPPLVAPNG DVGVDGMIIN LATLLANTVT NPFNNGYYQG PPTAPLEAVS ACPGIFGSGS YPGYAGRVLV DKTTGSSYNA RGLAGRKYLL PAMWDPQSST
301: CKTLV

Arabidopsis Description

EXL2Protein EXORDIUM-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE06]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.