Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 6
- golgi 5
- nucleus 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr3P05880_001 | |
| GSMUA_Achr8P23650_001 | |
| GSMUA_Achr9P14340_001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G64260.1 | GSMUA_Achr3P05880_001 | AT1G54060.1 | 21798944 |
| AT5G64260.1 | GSMUA_Achr8P23650_001 | AT1G54060.1 | 21798944 |
| AT5G64260.1 | GSMUA_Achr9P14340_001 | AT1G54060.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P14380_001 | Banana | extracellular | 87.0 | 77.6 |
| GSMUA_Achr6P02120_001 | Banana | endoplasmic reticulum, plasma membrane | 76.23 | 73.91 |
| CDY40721 | Canola | extracellular | 34.53 | 50.66 |
| GSMUA_Achr7P12690_001 | Banana | extracellular | 46.64 | 50.0 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, vacuole | 68.16 | 49.03 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, extracellular | 49.78 | 48.05 |
| GSMUA_Achr10P... | Banana | cytosol, extracellular, plastid | 46.64 | 47.93 |
| Bra009384.1-P | Field mustard | endoplasmic reticulum, extracellular | 61.44 | 46.13 |
| CDX69904 | Canola | endoplasmic reticulum, extracellular | 61.44 | 46.13 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, plasma membrane | 62.33 | 45.87 |
| CDY21583 | Canola | extracellular | 60.99 | 45.79 |
| CDY40722 | Canola | extracellular | 56.5 | 45.65 |
| VIT_18s0001g06030.t01 | Wine grape | extracellular, plasma membrane | 60.54 | 44.85 |
| AT5G09440.1 | Thale cress | extracellular | 55.61 | 44.6 |
| Solyc01g105410.2.1 | Tomato | endoplasmic reticulum | 60.09 | 44.52 |
| CDY44798 | Canola | extracellular | 53.81 | 44.28 |
| Zm00001d052799_P001 | Maize | endoplasmic reticulum, extracellular | 60.54 | 43.97 |
| PGSC0003DMT400032756 | Potato | extracellular | 59.19 | 43.85 |
| CDY43802 | Canola | endoplasmic reticulum, extracellular | 59.64 | 43.75 |
| Bra024280.1-P | Field mustard | endoplasmic reticulum, extracellular | 59.64 | 43.75 |
| OQU81032 | Sorghum | extracellular | 61.88 | 43.67 |
| GSMUA_Achr7P12680_001 | Banana | endoplasmic reticulum, extracellular | 50.22 | 43.58 |
| CDX84508 | Canola | endoplasmic reticulum, extracellular | 59.19 | 43.42 |
| CDY63721 | Canola | endoplasmic reticulum, extracellular | 59.19 | 43.42 |
| Bra028635.1-P | Field mustard | extracellular | 57.4 | 43.39 |
| KRH18203 | Soybean | nucleus | 58.74 | 43.23 |
| Bra031927.1-P | Field mustard | endoplasmic reticulum, extracellular | 58.74 | 43.09 |
| CDY31329 | Canola | endoplasmic reticulum, extracellular | 58.74 | 43.09 |
| PGSC0003DMT400079160 | Potato | extracellular, golgi | 59.64 | 43.04 |
| KRH72379 | Soybean | extracellular, vacuole | 60.54 | 42.72 |
| Solyc04g074470.1.1 | Tomato | nucleus | 59.19 | 42.72 |
| KRH43888 | Soybean | extracellular | 56.5 | 42.71 |
| GSMUA_Achr8P17620_001 | Banana | endoplasmic reticulum, extracellular | 49.78 | 42.69 |
| AT5G64260.1 | Thale cress | extracellular | 58.3 | 42.62 |
| KRH16767 | Soybean | extracellular, vacuole | 60.09 | 42.41 |
| KRH42138 | Soybean | nucleus | 57.4 | 42.11 |
| KRH10561 | Soybean | extracellular | 56.05 | 42.09 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane | 48.43 | 41.54 |
| VIT_03s0017g01210.t01 | Wine grape | extracellular, vacuole | 56.95 | 41.37 |
| KRH62322 | Soybean | nucleus | 57.4 | 40.63 |
| Bra028634.1-P | Field mustard | extracellular | 53.81 | 39.74 |
| CDY44799 | Canola | extracellular | 49.78 | 39.64 |
| KRH53039 | Soybean | extracellular | 56.05 | 39.19 |
| VIT_18s0001g06180.t01 | Wine grape | plasma membrane, plastid, vacuole | 61.88 | 38.12 |
| GSMUA_Achr7P12670_001 | Banana | endoplasmic reticulum, extracellular | 18.83 | 37.5 |
| Solyc04g074460.1.1 | Tomato | cytosol, plastid | 14.8 | 35.87 |
| GSMUA_Achr8P22420_001 | Banana | extracellular, plasma membrane | 39.01 | 31.07 |
| GSMUA_Achr11P... | Banana | cytosol, extracellular, plastid | 32.29 | 24.91 |
| GSMUA_Achr8P13400_001 | Banana | extracellular | 30.49 | 24.46 |
| GSMUA_Achr11P... | Banana | extracellular | 30.04 | 24.1 |
| GSMUA_Achr1P16640_001 | Banana | vacuole | 33.18 | 22.29 |
| GSMUA_Achr6P30430_001 | Banana | endoplasmic reticulum | 25.56 | 21.84 |
| GSMUA_Achr10P... | Banana | nucleus | 22.42 | 15.92 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P20420_001 | EnsemblPlants:GSMUA_Achr3T20420_001 | EnsemblPlantsGene:GSMUA_Achr3G20420_001 | InterPro:EXORDIUM-like | PANTHER:PTHR31279 | PANTHER:PTHR31279:SF8 |
| PFAM:PF04674 | SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000295ABBA | UniProt:M0SGA8 |
| MapMan:35.1 | : | : | : | : | : |
Description
Putative phosphate-induced protein 1 conserved region domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G20420_001]
Coordinates
chr3:-:21577164..21578341
Molecular Weight (calculated)
23514.2 Da
IEP (calculated)
9.128
GRAVY (calculated)
0.083
Length
223 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASPTLLLF SLLLVLSYSA AAAVPGRKLV LVQQPPLVLK YHNGPLLRGN YTLSLLFYGR FSAAQRSIVA DFVRSLSPSG ASPQPPSAAS WWRTTARYGG
101: SAVHFSLGPQ LLDESYSKGK LLSSPDGFCS SRQCPGQCAW PFHQPLYGPQ TPPLVSPNGD VGMEGAVTAC TGVFGSGAYP GYPGKVLVDP ATGASYNAWG
201: LAGRKYLLPA MWDPATSECS TLV
101: SAVHFSLGPQ LLDESYSKGK LLSSPDGFCS SRQCPGQCAW PFHQPLYGPQ TPPLVSPNGD VGMEGAVTAC TGVFGSGAYP GYPGKVLVDP ATGASYNAWG
201: LAGRKYLLPA MWDPATSECS TLV
001: MASFVMGYFL LFAVAFMCLD ARTDKTQDYT SFQYHKGALL TGDVSINLIW YGKFKPSQRA IVTDFVASLS SSRRSTMAQN PSVATWWKTV EKYYQFRKMT
101: TTRGLSLSLG EQILDQGYSM GKSLTEKNLK DLAAKGGQSY AVNVVLTSAD VTVQGFCMNR CGSHGTGSGS GKKGSRFAYI WVGNSETQCP GQCAWPFHAP
201: VYGPQSPPLV APNNDVGLDG MVINLASLMA ATATNPFGDG YYQGPKTAPL EAGSACTGVY GKGSYPGYAG ELLVDATTGG SYNVKGLNGR KYLLPALFDP
301: KTDSCSTLF
101: TTRGLSLSLG EQILDQGYSM GKSLTEKNLK DLAAKGGQSY AVNVVLTSAD VTVQGFCMNR CGSHGTGSGS GKKGSRFAYI WVGNSETQCP GQCAWPFHAP
201: VYGPQSPPLV APNNDVGLDG MVINLASLMA ATATNPFGDG YYQGPKTAPL EAGSACTGVY GKGSYPGYAG ELLVDATTGG SYNVKGLNGR KYLLPALFDP
301: KTDSCSTLF
Arabidopsis Description
EXL1Protein EXORDIUM-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6E4]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.