Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 6
- golgi 5
- plasma membrane 5
- endoplasmic reticulum 6
- vacuole 5
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43802 | Canola | endoplasmic reticulum, extracellular | 97.37 | 97.37 |
| AT5G64260.1 | Thale cress | extracellular | 91.12 | 90.82 |
| CDY63721 | Canola | endoplasmic reticulum, extracellular | 88.82 | 88.82 |
| CDY31329 | Canola | endoplasmic reticulum, extracellular | 88.82 | 88.82 |
| CDX69904 | Canola | endoplasmic reticulum, extracellular | 77.3 | 79.12 |
| CDY21583 | Canola | extracellular | 76.97 | 78.79 |
| CDY40722 | Canola | extracellular | 67.11 | 73.91 |
| KRH18203 | Soybean | nucleus | 72.04 | 72.28 |
| CDY44798 | Canola | extracellular | 63.49 | 71.22 |
| KRH42138 | Soybean | nucleus | 70.72 | 70.72 |
| CDY44799 | Canola | extracellular | 61.51 | 66.79 |
| KRH10561 | Soybean | extracellular | 64.47 | 65.99 |
| VIT_03s0017g01210.t01 | Wine grape | extracellular, vacuole | 66.45 | 65.8 |
| CDY40721 | Canola | extracellular | 32.57 | 65.13 |
| KRH43888 | Soybean | extracellular | 62.83 | 64.75 |
| Solyc04g074470.1.1 | Tomato | nucleus | 64.8 | 63.75 |
| PGSC0003DMT400079160 | Potato | extracellular, golgi | 64.8 | 63.75 |
| GSMUA_Achr3P20420_001 | Banana | endoplasmic reticulum, vacuole | 43.42 | 59.19 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, vacuole | 58.88 | 57.74 |
| GSMUA_Achr6P02120_001 | Banana | endoplasmic reticulum, plasma membrane | 43.09 | 56.96 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, plasma membrane | 55.92 | 56.11 |
| GSMUA_Achr8P14380_001 | Banana | extracellular | 45.07 | 54.8 |
| CDX90701 | Canola | endoplasmic reticulum, vacuole | 54.28 | 53.05 |
| CDY05033 | Canola | endoplasmic reticulum, vacuole | 54.28 | 52.55 |
| Os06t0219900-01 | Rice | extracellular, plasma membrane, vacuole | 53.29 | 51.59 |
| TraesCS7B01G083900.1 | Wheat | endoplasmic reticulum, vacuole | 52.3 | 50.0 |
| TraesCS7D01G180100.1 | Wheat | endoplasmic reticulum, plasma membrane | 52.3 | 50.0 |
| TraesCS7A01G178200.1 | Wheat | endoplasmic reticulum, vacuole | 52.3 | 49.84 |
| Zm00001d052799_P001 | Maize | endoplasmic reticulum, extracellular | 49.67 | 49.19 |
| OQU81032 | Sorghum | extracellular | 50.99 | 49.05 |
| Zm00001d037204_P001 | Maize | golgi, mitochondrion | 52.63 | 48.93 |
| HORVU7Hr1G036710.2 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 50.99 | 48.74 |
| KXG19617 | Sorghum | golgi, mitochondrion, vacuole | 51.97 | 48.17 |
| CDY31668 | Canola | endoplasmic reticulum, vacuole | 34.21 | 32.4 |
| CDX84257 | Canola | extracellular, vacuole | 32.89 | 31.15 |
| CDY46938 | Canola | vacuole | 34.21 | 30.86 |
| CDX91593 | Canola | vacuole | 34.21 | 30.86 |
| CDX71355 | Canola | endoplasmic reticulum, vacuole | 33.88 | 28.61 |
| CDY24324 | Canola | endoplasmic reticulum, vacuole | 33.55 | 28.49 |
| CDX92021 | Canola | endoplasmic reticulum, extracellular, vacuole | 30.59 | 28.44 |
| CDX74229 | Canola | endoplasmic reticulum, extracellular, vacuole | 29.93 | 27.74 |
| CDY28728 | Canola | mitochondrion | 30.59 | 22.63 |
| CDY43160 | Canola | cytosol | 30.59 | 17.03 |
Protein Annotations
| EnsemblPlants:CDX84508 | EnsemblPlantsGene:GSBRNA2T00141737001 | InterPro:EXORDIUM-like | PANTHER:PTHR31279 | PANTHER:PTHR31279:SF12 | PFAM:PF04674 |
| ProteinID:CDX84508 | ProteinID:CDX84508.1 | SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0002C8A334 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC03g49920D
Coordinates
chrLK031837:+:1523343..1524564
Molecular Weight (calculated)
32620.3 Da
IEP (calculated)
9.697
GRAVY (calculated)
0.011
Length
304 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHNNRFAIF LTFLYAIAGL SAAALVEEQP LVLKYHNGVL LKGNVTVNLI WYGKFTPIQR SVIVDFIRSL NSKDAASSAS PSVASWWKTT EKYKGGSSTL
101: VVGKQLLLEN YPLGKSLKNP YLRSLSTKLN GGLRSITVIL TAKDVTVEGF CMNRCGSHGT SVSKPRRAAN GAAYVWVGNS ETMCPGYCAW PFHQPIYGPQ
201: TPPLVAPNGD VGVDGMIINL ATLLANTVTN PFNNGYYQGP PTAPLEAVSA CTGIFGSGSY PGYPGQVLVD KTTGSSYNAR GLAGRKYLLP AMWDPQTLTC
301: KTLV
101: VVGKQLLLEN YPLGKSLKNP YLRSLSTKLN GGLRSITVIL TAKDVTVEGF CMNRCGSHGT SVSKPRRAAN GAAYVWVGNS ETMCPGYCAW PFHQPIYGPQ
201: TPPLVAPNGD VGVDGMIINL ATLLANTVTN PFNNGYYQGP PTAPLEAVSA CTGIFGSGSY PGYPGQVLVD KTTGSSYNAR GLAGRKYLLP AMWDPQTLTC
301: KTLV
001: MASNYRFAIF LTLFFATAGF SAAALVEEQP LVMKYHNGVL LKGNITVNLV WYGKFTPIQR SVIVDFIHSL NSKDVASSAA VPSVASWWKT TEKYKGGSST
101: LVVGKQLLLE NYPLGKSLKN PYLRALSTKL NGGLRSITVV LTAKDVTVER FCMSRCGTHG SSGSNPRRAA NGAAYVWVGN SETQCPGYCA WPFHQPIYGP
201: QTPPLVAPNG DVGVDGMIIN LATLLANTVT NPFNNGYYQG PPTAPLEAVS ACPGIFGSGS YPGYAGRVLV DKTTGSSYNA RGLAGRKYLL PAMWDPQSST
301: CKTLV
101: LVVGKQLLLE NYPLGKSLKN PYLRALSTKL NGGLRSITVV LTAKDVTVER FCMSRCGTHG SSGSNPRRAA NGAAYVWVGN SETQCPGYCA WPFHQPIYGP
201: QTPPLVAPNG DVGVDGMIIN LATLLANTVT NPFNNGYYQG PPTAPLEAVS ACPGIFGSGS YPGYAGRVLV DKTTGSSYNA RGLAGRKYLL PAMWDPQSST
301: CKTLV
Arabidopsis Description
EXL2Protein EXORDIUM-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE06]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.