Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 5
- golgi 5
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY24324 | Canola | endoplasmic reticulum, vacuole | 98.06 | 98.6 |
| AT2G17230.1 | Thale cress | endoplasmic reticulum, vacuole | 89.44 | 88.71 |
| VIT_03s0038g03860.t01 | Wine grape | extracellular | 70.28 | 73.55 |
| KRG92438 | Soybean | nucleus | 69.44 | 73.1 |
| Solyc10g074540.1.1 | Tomato | nucleus | 69.44 | 72.67 |
| KRH65072 | Soybean | cytosol | 24.44 | 72.13 |
| PGSC0003DMT400043340 | Potato | extracellular | 69.44 | 71.02 |
| KRH34361 | Soybean | nucleus | 68.61 | 64.32 |
| CDY31668 | Canola | endoplasmic reticulum, vacuole | 48.89 | 54.83 |
| CDX84257 | Canola | extracellular, vacuole | 48.06 | 53.89 |
| CDX91593 | Canola | vacuole | 49.44 | 52.82 |
| CDY46938 | Canola | vacuole | 49.44 | 52.82 |
| CDX90701 | Canola | endoplasmic reticulum, vacuole | 30.56 | 35.37 |
| CDY05033 | Canola | endoplasmic reticulum, vacuole | 30.83 | 35.35 |
| CDX84508 | Canola | endoplasmic reticulum, extracellular | 28.61 | 33.88 |
| CDY43802 | Canola | endoplasmic reticulum, extracellular | 28.33 | 33.55 |
| CDY63721 | Canola | endoplasmic reticulum, extracellular | 28.06 | 33.22 |
| CDY31329 | Canola | endoplasmic reticulum, extracellular | 27.78 | 32.89 |
| CDY44798 | Canola | extracellular | 24.44 | 32.47 |
| CDX69904 | Canola | endoplasmic reticulum, extracellular | 26.11 | 31.65 |
| CDY21583 | Canola | extracellular | 26.11 | 31.65 |
| CDY40722 | Canola | extracellular | 23.61 | 30.8 |
| CDY40721 | Canola | extracellular | 12.5 | 29.61 |
| CDY44799 | Canola | extracellular | 22.78 | 29.29 |
| CDX92021 | Canola | endoplasmic reticulum, extracellular, vacuole | 21.67 | 23.85 |
| CDX74229 | Canola | endoplasmic reticulum, extracellular, vacuole | 21.67 | 23.78 |
| CDY28728 | Canola | mitochondrion | 21.39 | 18.73 |
| CDY43160 | Canola | cytosol | 20.83 | 13.74 |
Protein Annotations
| EnsemblPlants:CDX71355 | EnsemblPlantsGene:GSBRNA2T00145059001 | InterPro:EXORDIUM-like | PANTHER:PTHR31279 | PANTHER:PTHR31279:SF36 | PFAM:PF04674 |
| ProteinID:CDX71355 | ProteinID:CDX71355.1 | SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EBA8CC |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC07g06340D
Coordinates
chrLK031792:-:3594456..3595779
Molecular Weight (calculated)
39051.5 Da
IEP (calculated)
8.126
GRAVY (calculated)
-0.128
Length
360 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSPAINLFF ALFSFLIFSV SSSLALSQSQ TKKPATVQTL NVAAAEIKMV NPKLPPRSLS LTSSKRYEGS SDLVHLRYHM GPVLSSSPIN IYVIWYGRWS
101: RPHKALIRDF LNSISDAKAP SPSVAEWWRT ASLYTDQTGA NVSRSVLVAG EYSDAKYSHG QHLTRLSIQE VIASAARSAS FPVDHKNGMY LVLTSHDVTM
201: QDFCRAVCGF HYFTFPSMVG YTMPYAWVGQ SGKQCPEVCA YPFALPGYMG HGGPGELRPP NGETGVDGMV SVIGHELAEV VSNPLINAWY AGEDPTAPTE
301: IGDLCEGLYG TGGGGGYIGQ VMQDRGGKTF NMNGKGGRKF LVQWIWNPNL KACSGPNSVD
101: RPHKALIRDF LNSISDAKAP SPSVAEWWRT ASLYTDQTGA NVSRSVLVAG EYSDAKYSHG QHLTRLSIQE VIASAARSAS FPVDHKNGMY LVLTSHDVTM
201: QDFCRAVCGF HYFTFPSMVG YTMPYAWVGQ SGKQCPEVCA YPFALPGYMG HGGPGELRPP NGETGVDGMV SVIGHELAEV VSNPLINAWY AGEDPTAPTE
301: IGDLCEGLYG TGGGGGYIGQ VMQDRGGKTF NMNGKGGRKF LVQWIWNPNL KACSGPNSVD
001: MSSPATTITF FFFFTLSSFF YITSSLQNNN NNKHTATVNS LNIPSAAAEI TLVNPKLPPR SLSLTSSKKF EGSSNLVHLR YHMGPVLSSS PINIYVIWYG
101: QWSRPHKSLI RDFLNSISDA KAPSPSVSEW WRTASLYTDQ TGSNVSRSVL IAGEYSDSKY SHGQHLTRLT IQEVIASAAR SASFPVDHKN GMYLVLTSHD
201: VTMQDFCRAV CGFHYFTFPS MVGYTMPYAW VGQSGKQCPE VCAYPFALPG YMGHGGPGEL RPPNGETGVD GMVSVIGHEL AEVVSNPLIN AWYAGEDPTA
301: PTEIGDLCEG LYGSGGGGGY IGQVMRDREG KTFNMNGKGG RKFLVQWIWN PNLKACSGPN SVD
101: QWSRPHKSLI RDFLNSISDA KAPSPSVSEW WRTASLYTDQ TGSNVSRSVL IAGEYSDSKY SHGQHLTRLT IQEVIASAAR SASFPVDHKN GMYLVLTSHD
201: VTMQDFCRAV CGFHYFTFPS MVGYTMPYAW VGQSGKQCPE VCAYPFALPG YMGHGGPGEL RPPNGETGVD GMVSVIGHEL AEVVSNPLIN AWYAGEDPTA
301: PTEIGDLCEG LYGSGGGGGY IGQVMRDREG KTFNMNGKGG RKFLVQWIWN PNLKACSGPN SVD
Arabidopsis Description
EXL5Protein EXORDIUM-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SII5]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.