CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 5
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
CDY02487
CDY08216
CDY26148
CDY33093
CDY51405
CDY61477

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G64260.1	CDY02487	AT1G54060.1	21798944
AT5G64260.1	CDY08216	AT1G54060.1	21798944
AT5G64260.1	CDY26148	AT1G54060.1	21798944
AT5G64260.1	CDY33093	AT1G54060.1	21798944
AT5G64260.1	CDY51405	AT1G54060.1	21798944
AT5G64260.1	CDY61477	AT1G54060.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031927.1-P	Field mustard	endoplasmic reticulum, extracellular	100.0	100.0
CDY63721	Canola	endoplasmic reticulum, extracellular	98.36	98.36
CDY43802	Canola	endoplasmic reticulum, extracellular	89.14	89.14
CDX84508	Canola	endoplasmic reticulum, extracellular	88.82	88.82
AT5G64260.1	Thale cress	extracellular	88.16	87.87
CDX69904	Canola	endoplasmic reticulum, extracellular	77.3	79.12
CDY21583	Canola	extracellular	76.64	78.45
CDY40722	Canola	extracellular	68.75	75.72
CDY44798	Canola	extracellular	66.45	74.54
KRH18203	Soybean	nucleus	71.71	71.95
CDY44799	Canola	extracellular	64.47	70.0
KRH42138	Soybean	nucleus	69.41	69.41
CDY40721	Canola	extracellular	33.88	67.76
KRH10561	Soybean	extracellular	63.82	65.32
VIT_03s0017g01210.t01	Wine grape	extracellular, vacuole	65.13	64.5
KRH43888	Soybean	extracellular	61.84	63.73
Solyc04g074470.1.1	Tomato	nucleus	63.16	62.14
PGSC0003DMT400079160	Potato	extracellular, golgi	63.16	62.14
GSMUA_Achr3P20420_001	Banana	endoplasmic reticulum, vacuole	43.09	58.74
GSMUA_Achr6P02120_001	Banana	endoplasmic reticulum, plasma membrane	43.75	57.83
GSMUA_Achr10P...	Banana	endoplasmic reticulum, vacuole	57.89	56.77
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, plasma membrane	55.26	55.45
GSMUA_Achr8P14380_001	Banana	extracellular	45.39	55.2
CDX90701	Canola	endoplasmic reticulum, vacuole	55.26	54.02
CDY05033	Canola	endoplasmic reticulum, vacuole	54.93	53.18
Os06t0219900-01	Rice	extracellular, plasma membrane, vacuole	53.62	51.91
TraesCS7D01G180100.1	Wheat	endoplasmic reticulum, plasma membrane	53.29	50.94
TraesCS7B01G083900.1	Wheat	endoplasmic reticulum, vacuole	53.29	50.94
TraesCS7A01G178200.1	Wheat	endoplasmic reticulum, vacuole	53.29	50.78
HORVU7Hr1G036710.2	Barley	endoplasmic reticulum, extracellular, plasma membrane	51.97	49.69
Zm00001d052799_P001	Maize	endoplasmic reticulum, extracellular	50.0	49.51
KXG19617	Sorghum	golgi, mitochondrion, vacuole	53.29	49.39
Zm00001d037204_P001	Maize	golgi, mitochondrion	52.96	49.24
OQU81032	Sorghum	extracellular	50.99	49.05
CDY31668	Canola	endoplasmic reticulum, vacuole	33.88	32.09
CDX84257	Canola	extracellular, vacuole	32.89	31.15
CDX92021	Canola	endoplasmic reticulum, extracellular, vacuole	32.24	29.97
CDY46938	Canola	vacuole	32.89	29.67
CDX91593	Canola	vacuole	32.89	29.67
CDX74229	Canola	endoplasmic reticulum, extracellular, vacuole	31.58	29.27
CDX71355	Canola	endoplasmic reticulum, vacuole	32.89	27.78
CDY24324	Canola	endoplasmic reticulum, vacuole	32.57	27.65
CDY28728	Canola	mitochondrion	32.24	23.84
CDY43160	Canola	cytosol	32.24	17.95

Protein Annotations

EnsemblPlants:CDY31329	EnsemblPlantsGene:GSBRNA2T00047508001	InterPro:EXORDIUM-like	PANTHER:PTHR31279	PANTHER:PTHR31279:SF12	PFAM:PF04674
ProteinID:CDY31329	ProteinID:CDY31329.1	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002546714	UniProt:A0A078H1K4
MapMan:35.1	:	:	:	:	:

Description

BnaA02g34120DBnaA02g34120D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H1K4]

Coordinates

chrLK032270:-:245164..246078

Molecular Weight (calculated)

32452.1 Da

IEP (calculated)

9.781

GRAVY (calculated)

0.006

Length

304 amino acids

Sequence
(BLAST)

001: MAYNYRFAFF LTVLTALAGI SSAALVKEQP LVLKYHNGAL LKGNINVNLV WYGKFTPTQR SVIVDFIRSL NSKEATTSAA PSVASWWKTT EKYKGGASTL
101: VVGKQLLLEN YPLGKSLKNP NLRALSTKLN GGLRSITVVL TAKDVSVEGF CMNRCGSHGS SVSTSRRAAN GEAYVWVGNA ETMCPGYCAW PFHQPIYGPQ
201: GPPLVAPNGD VGVDGMIINL ATLLANTVTN PFKNGYYQGP PTAPLEAVSA CTGMFGSGSY PGYAGLVLVD KTTGSSYNAR GLAGRKYLLP AMWDPQTSTC
301: KTLV

Best Arabidopsis Sequence Match ( AT5G64260.1 )
(BLAST)

001: MASNYRFAIF LTLFFATAGF SAAALVEEQP LVMKYHNGVL LKGNITVNLV WYGKFTPIQR SVIVDFIHSL NSKDVASSAA VPSVASWWKT TEKYKGGSST
101: LVVGKQLLLE NYPLGKSLKN PYLRALSTKL NGGLRSITVV LTAKDVTVER FCMSRCGTHG SSGSNPRRAA NGAAYVWVGN SETQCPGYCA WPFHQPIYGP
201: QTPPLVAPNG DVGVDGMIIN LATLLANTVT NPFNNGYYQG PPTAPLEAVS ACPGIFGSGS YPGYAGRVLV DKTTGSSYNA RGLAGRKYLL PAMWDPQSST
301: CKTLV

Arabidopsis Description

EXL2Protein EXORDIUM-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE06]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.