Factsheet for GSMUA_Achr6P30430_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P12670_001	Banana	endoplasmic reticulum, extracellular	25.67	59.82
GSMUA_Achr10P...	Banana	cytosol, extracellular, plastid	36.02	43.32
GSMUA_Achr7P12680_001	Banana	endoplasmic reticulum, extracellular	42.15	42.8
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular	37.55	42.42
Solyc04g074430.1.1	Tomato	nucleus	18.77	37.12
GSMUA_Achr6P02120_001	Banana	endoplasmic reticulum, plasma membrane	26.82	30.43
TraesCS6A01G316600.1	Wheat	endoplasmic reticulum, extracellular	35.63	29.9
TraesCS6B01G347100.1	Wheat	endoplasmic reticulum, extracellular	35.25	29.77
GSMUA_Achr8P14380_001	Banana	extracellular	28.35	29.6
Os02t0757100-01	Rice	extracellular	35.25	29.58
TraesCS6D01G296100.1	Wheat	endoplasmic reticulum, extracellular	34.87	29.26
VIT_18s0001g06150.t01	Wine grape	vacuole	35.63	29.15
KRH16766	Soybean	nucleus	34.1	28.34
VIT_18s0001g06170.t01	Wine grape	endoplasmic reticulum, vacuole	34.48	28.3
EES07217	Sorghum	endoplasmic reticulum, extracellular	33.72	28.3
HORVU6Hr1G077750.1	Barley	endoplasmic reticulum, extracellular	34.1	28.25
KRH53040	Soybean	nucleus	33.33	28.25
KRH72378	Soybean	nucleus	33.72	28.11
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, plasma membrane	32.57	28.05
VIT_18s0001g06020.t01	Wine grape	endoplasmic reticulum, vacuole	34.1	27.99
GSMUA_Achr10P...	Banana	endoplasmic reticulum, vacuole	32.95	27.74
AT4G08950.1	Thale cress	extracellular, vacuole	33.33	27.71
Zm00001d052205_P001	Maize	extracellular	33.33	27.62
Bra000660.1-P	Field mustard	endoplasmic reticulum, vacuole	32.95	27.39
CDX90701	Canola	endoplasmic reticulum, vacuole	32.57	27.33
PGSC0003DMT400079158	Potato	endoplasmic reticulum, vacuole	32.57	27.33
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane	27.2	27.31
PGSC0003DMT400079157	Potato	endoplasmic reticulum, vacuole	32.18	26.92
AT1G35140.1	Thale cress	extracellular	31.8	26.86
Zm00001d018107_P001	Maize	endoplasmic reticulum, extracellular	32.18	26.75
CDY05033	Canola	endoplasmic reticulum, vacuole	32.18	26.75
PGSC0003DMT400079159	Potato	vacuole	32.95	26.71
Solyc04g074440.1.1	Tomato	nucleus	32.18	26.67
Solyc04g074410.1.1	Tomato	nucleus	31.8	26.6
KRH53041	Soybean	nucleus	32.95	26.54
Solyc04g074450.1.1	Tomato	extracellular	31.8	26.43
PGSC0003DMT400079207	Potato	endoplasmic reticulum, vacuole	32.18	26.42
PGSC0003DMT400079208	Potato	endoplasmic reticulum, vacuole	32.18	26.42
PGSC0003DMT400079209	Potato	extracellular	31.42	26.2
KRH16765	Soybean	nucleus	31.42	26.2
PGSC0003DMT400079206	Potato	endoplasmic reticulum, extracellular	31.42	25.79
GSMUA_Achr3P20420_001	Banana	endoplasmic reticulum, vacuole	21.84	25.56
KRH62323	Soybean	plastid	34.1	25.0
KRH62324	Soybean	nucleus	34.87	24.07
GSMUA_Achr7P12690_001	Banana	extracellular	18.01	22.6
Solyc04g074420.1.1	Tomato	nucleus	6.9	20.22
GSMUA_Achr8P17620_001	Banana	endoplasmic reticulum, extracellular	19.54	19.62
GSMUA_Achr8P22420_001	Banana	extracellular, plasma membrane	20.31	18.93
GSMUA_Achr1P16640_001	Banana	vacuole	20.31	15.96
GSMUA_Achr11P...	Banana	extracellular	16.48	15.47
GSMUA_Achr8P13400_001	Banana	extracellular	16.48	15.47
GSMUA_Achr11P...	Banana	cytosol, extracellular, plastid	16.48	14.88
GSMUA_Achr10P...	Banana	nucleus	15.71	13.06

Protein Annotations

EnsemblPlants:GSMUA_Achr6P30430_001	EnsemblPlants:GSMUA_Achr6T30430_001	EnsemblPlantsGene:GSMUA_Achr6G30430_001	InterPro:EXORDIUM-like	PANTHER:PTHR31279	PANTHER:PTHR31279:SF3
PFAM:PF04674	SEG:seg	SignalP:SignalP-noTM	UniParc:UPI000294D2AB	UniProt:M0TBI8	MapMan:35.1

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G30430_001]

Coordinates

chr6:-:30441498..30442762

Molecular Weight (calculated)

28168.6 Da

IEP (calculated)

10.347

GRAVY (calculated)

-0.433

Length

261 amino acids

Sequence
(BLAST)

001: MAAPASSSSG CSALLGFVLA AALFQCSHGG STLAGLVEQQ PLAMTYHKGP LLTGPLSVNL IFYGKFTASQ KAIYYATSRT PLPKLKLGKQ IVDAGYSLGK
101: SLRDADIAKL AARGAPRNAI NVVLTAEDVA VERFCMSRCG SHAAAPDSAP GPSTSPSTGR RHHRWWRPTA TSGRRLLAPG CTQREPTRAT RGTYRWTPSP
201: EPATTRMGPT AGSTWSQPSS TRRRPRVRPW CDEKYVPILE QICNNDGNYG CNDVKEKHER V

Best Arabidopsis Sequence Match ( AT4G08950.1 )
(BLAST)

001: MYLLVFKLFL FLSLLQISVS ARNLASQEPN QFQLLKYHKG ALLSGKISVN LIWYGKFKPS QRAIISDFIT SLTHTSPTSK TLHQPSVATW WKTTEKYYKL
101: ATPSKNSSPL SLTLGKQIID ESCSLGKSLT DKKIQTLASK GDQRNAINVV LTSADVTVTG FGMSRCGTHG HARGLGKRGS KFAYIWVGNS ETQCPGQCAW
201: PFHAPVYGPQ SPPLVAPNND VGLDGMVINL ASLLAGTATN PFGNGYYQGP QNAPLEAASA CPGVYGKGAY PGYAGDLLVD TTTGGSFNAY GANGRKFLLP
301: ALYDPTTSAC STMV

Arabidopsis Description

EXOProtein EXORDIUM [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPE7]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.