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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 7
  • plasma membrane 6
  • golgi 5
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:nucleus, secretory
BaCelLo:secretory
EpiLoc:nucleus
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_18s0001g06170.t01 Wine grape endoplasmic reticulum, vacuole 72.05 72.96
VIT_18s0001g06020.t01 Wine grape endoplasmic reticulum, vacuole 71.43 72.33
KRH53040 Soybean nucleus 66.77 69.81
KRH16766 Soybean nucleus 68.01 69.75
KRH72378 Soybean nucleus 66.46 68.37
PGSC0003DMT400079209 Potato extracellular 65.84 67.73
PGSC0003DMT400079157 Potato endoplasmic reticulum, vacuole 65.53 67.63
PGSC0003DMT400079158 Potato endoplasmic reticulum, vacuole 64.91 67.2
PGSC0003DMT400079208 Potato endoplasmic reticulum, vacuole 66.15 66.98
PGSC0003DMT400079207 Potato endoplasmic reticulum, vacuole 66.15 66.98
GSMUA_Achr10P... Banana cytosol, extracellular, plastid 45.03 66.82
PGSC0003DMT400079206 Potato endoplasmic reticulum, extracellular 65.84 66.67
GSMUA_Achr10P... Banana endoplasmic reticulum, extracellular 45.34 63.2
AT1G35140.1 Thale cress extracellular 59.63 62.14
GSMUA_Achr7P12680_001 Banana endoplasmic reticulum, extracellular 47.2 59.14
PGSC0003DMT400032756 Potato extracellular 54.97 58.8
KRH62323 Soybean plastid 64.6 58.43
EES07217 Sorghum endoplasmic reticulum, extracellular 55.28 57.23
Os02t0757100-01 Rice extracellular 54.97 56.91
HORVU6Hr1G077750.1 Barley endoplasmic reticulum, extracellular 54.97 56.19
TraesCS6D01G296100.1 Wheat endoplasmic reticulum, extracellular 54.04 55.95
TraesCS6A01G316600.1 Wheat endoplasmic reticulum, extracellular 54.04 55.95
Zm00001d052205_P001 Maize extracellular 54.35 55.56
Os02t0756200-02 Rice extracellular 53.11 55.52
Zm00001d018107_P001 Maize endoplasmic reticulum, extracellular 54.04 55.41
TraesCS6B01G347100.1 Wheat endoplasmic reticulum, extracellular 53.11 55.34
PGSC0003DMT400079205 Potato endoplasmic reticulum, vacuole 53.11 55.34
GSMUA_Achr7P12690_001 Banana extracellular 35.71 55.29
Os06t0220000-01 Rice extracellular 48.45 55.12
HORVU6Hr1G077790.1 Barley endoplasmic reticulum, extracellular 52.8 54.84
TraesCSU01G264500.1 Wheat plastid 49.38 54.83
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane 44.1 54.62
TraesCS6B01G347200.1 Wheat endoplasmic reticulum, extracellular, vacuole 53.42 54.09
TraesCS6A01G316900.1 Wheat endoplasmic reticulum, extracellular, vacuole 51.86 53.87
PGSC0003DMT400079160 Potato extracellular, golgi 51.55 53.72
TraesCS6D01G296400.1 Wheat endoplasmic reticulum, extracellular, vacuole 51.86 53.7
TraesCS6B01G347400.1 Wheat endoplasmic reticulum, extracellular, vacuole 51.55 53.55
EES05496 Sorghum golgi, vacuole 54.66 53.33
TraesCS6A01G316700.1 Wheat endoplasmic reticulum 53.11 53.27
TraesCS7A01G178400.1 Wheat extracellular 52.8 53.12
TraesCS7D01G180300.1 Wheat extracellular 52.8 53.12
TraesCS6D01G296200.1 Wheat endoplasmic reticulum 53.11 52.94
TraesCS7D01G180400.1 Wheat extracellular 52.48 52.81
Os02t0756600-01 Rice extracellular 51.24 52.72
TraesCS7D01G180600.1 Wheat extracellular 52.48 52.65
TraesCS7B01G084100.1 Wheat extracellular 52.8 52.63
TraesCS7B01G084300.1 Wheat extracellular, golgi 52.48 52.32
Zm00001d052206_P001 Maize plastid 52.8 52.31
Os02t0756800-01 Rice extracellular 53.11 52.13
Zm00001d044864_P001 Maize mitochondrion 52.8 51.83
TraesCS7A01G178500.1 Wheat extracellular 51.86 51.7
EES05498 Sorghum endoplasmic reticulum, vacuole 49.69 51.61
HORVU6Hr1G077780.1 Barley endoplasmic reticulum, extracellular 49.69 50.79
TraesCS6A01G316800.1 Wheat endoplasmic reticulum, extracellular, vacuole 49.38 50.48
TraesCS6D01G296300.1 Wheat extracellular, plasma membrane 49.38 50.48
TraesCS6B01G347300.1 Wheat endoplasmic reticulum, extracellular 49.07 50.16
Zm00001d018105_P001 Maize extracellular 48.45 49.52
TraesCS7D01G180500.1 Wheat extracellular 47.83 49.2
EER88094 Sorghum endoplasmic reticulum, vacuole 50.93 48.52
KXG30713 Sorghum golgi, vacuole 47.83 48.12
Zm00001d037205_P001 Maize extracellular 49.69 47.62
Os06t0220200-00 Rice endoplasmic reticulum, extracellular, vacuole 46.89 47.04
Os06t0220300-00 Rice extracellular 45.96 46.84
EER89439 Sorghum extracellular 50.31 45.89
HORVU6Hr1G077770.1 Barley mitochondrion, plastid 53.42 41.45
GSMUA_Achr7P12670_001 Banana endoplasmic reticulum, extracellular 13.98 40.18
PGSC0003DMT400038389 Potato cytosol 11.49 36.63
GSMUA_Achr6P30430_001 Banana endoplasmic reticulum 26.71 32.95
PGSC0003DMT400093900 Potato mitochondrion 34.16 32.54
PGSC0003DMT400043340 Potato extracellular 34.78 31.82
PGSC0003DMT400059235 Potato endoplasmic reticulum, plasma membrane 33.85 31.23
PGSC0003DMT400072046 Potato extracellular, vacuole 33.23 30.84
PGSC0003DMT400072047 Potato extracellular, vacuole 33.23 30.84
Zm00001d018106_P001 Maize plastid 47.83 25.84
HORVU7Hr1G036780.8 Barley golgi 27.95 25.57
PGSC0003DMT400089791 Potato cytosol 10.56 24.82
PGSC0003DMT400095305 Potato cytosol 7.76 20.33
HORVU6Hr1G077820.1 Barley endoplasmic reticulum 11.8 19.29
Protein Annotations
EntrezGene:102581036MapMan:35.1InterPro:EXORDIUM-likeGO:GO:0001666GO:GO:0005575GO:GO:0005618
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005794GO:GO:0006950GO:GO:0008150
GO:GO:0009505GO:GO:0009628GO:GO:0030312UniProt:M1D1C4PFAM:PF04674EnsemblPlantsGene:PGSC0003DMG400030810
PGSC:PGSC0003DMG400030810EnsemblPlants:PGSC0003DMT400079159PANTHER:PTHR31279PANTHER:PTHR31279:SF35SignalP:SignalP-noTMUniParc:UPI00029495B3
RefSeq:XP_006363277.1SEG:seg::::
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400030810]
Coordinates
chr4:+:63968340..63969514
Molecular Weight (calculated)
34684.3 Da
IEP (calculated)
9.238
GRAVY (calculated)
-0.116
Length
322 amino acids
Sequence
(BLAST)
001: MASLINTTFS FLLQLSIALS FFHFCVATRK LEEQTDLYKF HYHNGPLLTG KISINLIWYG KFKPNQRAII SDFITSLSSS STKISPNQPS VATWWKSTDK
101: YFSLLKSKKS SPLFLSLGNQ ILDESYSLGK SLKDEHIKQL AAKGDKKNAI NIVLTASDVA VGRFCTSRCG THGSSLSPNN TPPKGKIYKF AYIWVGNSEK
201: QCPDQCAWPF HQPIYGPQGP ALVAPNNDVG SDGMVINLAS LLAGTVTNPF GNGYYQGLAD APLEAASACP GVYGSGAYPG YAGNLLVDPT TGASYNAHGA
301: NGRKFLLPAL FNPSTSSCST LV
Best Arabidopsis Sequence Match ( AT1G35140.1 )
(BLAST)
001: MASFVMGYFL LFAVAFMCLD ARTDKTQDYT SFQYHKGALL TGDVSINLIW YGKFKPSQRA IVTDFVASLS SSRRSTMAQN PSVATWWKTV EKYYQFRKMT
101: TTRGLSLSLG EQILDQGYSM GKSLTEKNLK DLAAKGGQSY AVNVVLTSAD VTVQGFCMNR CGSHGTGSGS GKKGSRFAYI WVGNSETQCP GQCAWPFHAP
201: VYGPQSPPLV APNNDVGLDG MVINLASLMA ATATNPFGDG YYQGPKTAPL EAGSACTGVY GKGSYPGYAG ELLVDATTGG SYNVKGLNGR KYLLPALFDP
301: KTDSCSTLF
Arabidopsis Description
EXL1Protein EXORDIUM-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6E4]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.