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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 6
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
extracellular: 19038476
extracellular: 21255809
msms PMID: 21255809 doi
T Shinano, S Komatsu, T Yoshimura, S Tokutake, FJ Kong, T Watanabe, J Wasaki, M Osaki
National Agriculture and Food Research Organization, National Agricultural Research Center for Hokkaido Region, 1-Hitsujigaoka, Toyohira-ku, Sapporo 062-8555, Japan. shinano@affrc.go.jp
msms PMID: 19038476 doi
XY Chen, ST Kim, WK Cho, Y Rim, S Kim, SW Kim, KY Kang, ZY Park, JY Kim
Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju 660-701, Republic of Korea.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G316900.1 Wheat endoplasmic reticulum, extracellular, vacuole 79.55 79.03
TraesCS6B01G347400.1 Wheat endoplasmic reticulum, extracellular, vacuole 79.22 78.71
TraesCS6D01G296400.1 Wheat endoplasmic reticulum, extracellular, vacuole 78.57 77.81
HORVU6Hr1G077790.1 Barley endoplasmic reticulum, extracellular 78.25 77.74
EES05498 Sorghum endoplasmic reticulum, vacuole 76.62 76.13
Solyc04g074420.1.1 Tomato nucleus 20.13 69.66
Os02t0756600-01 Rice extracellular 66.88 65.81
Os06t0220000-01 Rice extracellular 58.12 63.25
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane 52.27 61.92
Os02t0756800-01 Rice extracellular 65.26 61.28
GSMUA_Achr7P12690_001 Banana extracellular 40.26 59.62
Os06t0220200-00 Rice endoplasmic reticulum, extracellular, vacuole 58.44 56.07
KRH16765 Soybean nucleus 56.82 55.91
KRH16766 Soybean nucleus 56.17 55.1
Solyc04g074450.1.1 Tomato extracellular 56.17 55.1
PGSC0003DMT400079209 Potato extracellular 55.84 54.95
Solyc04g074410.1.1 Tomato nucleus 55.19 54.49
PGSC0003DMT400079157 Potato endoplasmic reticulum, vacuole 55.19 54.49
PGSC0003DMT400079158 Potato endoplasmic reticulum, vacuole 54.55 54.02
VIT_18s0001g06150.t01 Wine grape vacuole 55.84 53.92
AT4G08950.1 Thale cress extracellular, vacuole 54.87 53.82
KRH53041 Soybean nucleus 56.49 53.7
CDX90701 Canola endoplasmic reticulum, vacuole 54.22 53.7
VIT_18s0001g06170.t01 Wine grape endoplasmic reticulum, vacuole 55.19 53.46
PGSC0003DMT400079208 Potato endoplasmic reticulum, vacuole 55.19 53.46
Solyc04g074440.1.1 Tomato nucleus 54.55 53.33
Bra000660.1-P Field mustard endoplasmic reticulum, vacuole 54.22 53.18
VIT_18s0001g06020.t01 Wine grape endoplasmic reticulum, vacuole 54.87 53.14
PGSC0003DMT400079206 Potato endoplasmic reticulum, extracellular 54.87 53.14
PGSC0003DMT400079207 Potato endoplasmic reticulum, vacuole 54.87 53.14
PGSC0003DMT400079159 Potato vacuole 55.52 53.11
KRH53040 Soybean nucleus 52.92 52.92
KRH72378 Soybean nucleus 53.57 52.72
CDY05033 Canola endoplasmic reticulum, vacuole 53.25 52.23
AT1G35140.1 Thale cress extracellular 51.95 51.78
Os06t0220300-00 Rice extracellular 52.92 51.58
Os02t0757100-01 Rice extracellular 50.32 49.84
Os06t0219900-01 Rice extracellular, plasma membrane, vacuole 49.68 48.73
KRH62324 Soybean nucleus 56.17 45.77
Solyc04g074430.1.1 Tomato nucleus 19.48 45.45
KRH62323 Soybean plastid 52.27 45.22
Os10t0376400-00 Rice extracellular, plasma membrane 48.7 44.91
HORVU6Hr1G077820.1 Barley endoplasmic reticulum 26.95 42.13
Os07t0496700-01 Rice extracellular 34.42 32.42
Os06t0133600-01 Rice golgi, vacuole 35.39 31.32
Protein Annotations
EMBL:AK063454EnsemblPlants:Os02t0756200-02EnsemblPlantsGene:Os02g0756200EntrezGene:4330777InterPro:EXORDIUM-likePANTHER:PTHR31279
PANTHER:PTHR31279:SF14PFAM:PF04674ProteinID:BAD17074.1ProteinID:BAD17256.1ProteinID:BAF10081.1ProteinID:BAS80994.1
ProteinID:EAZ24675.1RefSeq:XP_015623938.1SignalP:SignalP-noTMUniParc:UPI000035ADCDUniProt:Q6Z681MapMan:35.1
Description
Similar to Phi-1-like phosphate-induced protein. (Os02t0756200-01);Similar to Phi-1 protein. (Os02t0756200-02)
Coordinates
chr2:-:31824134..31825261
Molecular Weight (calculated)
32231.2 Da
IEP (calculated)
4.955
GRAVY (calculated)
0.035
Length
308 amino acids
Sequence
(BLAST)
001: MASFRLMIAA VSLSLVQLSM GSRRLMELYI PPASDQLTYH HGSVLSGDIP VSILWYGKFT PTQMSIIADF VVSLTGAPNA ATPSVGQWWG TIEQLYLSNA
101: ATNSQTSTRV LLDEQVSDEQ CSLGKSLTLA QIDQLAARVG TKRGGVALVF TDEDVTVEGF CSSRCGKHGS DASAGTTHIW VGNSAKQCPG QCAWPFAQPV
201: YGPQGTPLVA PNNDVGADGM VMILASMVAG TVTNPYGDGF YQGPQDAPLE ACSACPGVYG SGAYPGNAGK LLVDATTGAS YNANGANRRK YLLPALYNPA
301: TSSCDTLV
Best Arabidopsis Sequence Match ( AT4G08950.1 )
(BLAST)
001: MYLLVFKLFL FLSLLQISVS ARNLASQEPN QFQLLKYHKG ALLSGKISVN LIWYGKFKPS QRAIISDFIT SLTHTSPTSK TLHQPSVATW WKTTEKYYKL
101: ATPSKNSSPL SLTLGKQIID ESCSLGKSLT DKKIQTLASK GDQRNAINVV LTSADVTVTG FGMSRCGTHG HARGLGKRGS KFAYIWVGNS ETQCPGQCAW
201: PFHAPVYGPQ SPPLVAPNND VGLDGMVINL ASLLAGTATN PFGNGYYQGP QNAPLEAASA CPGVYGKGAY PGYAGDLLVD TTTGGSFNAY GANGRKFLLP
301: ALYDPTTSAC STMV
Arabidopsis Description
EXOProtein EXORDIUM [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPE7]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.