Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G077790.1 | Barley | endoplasmic reticulum, extracellular | 57.36 | 36.45 |
| TraesCS6B01G347400.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 54.82 | 34.84 |
| TraesCS6D01G296400.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 54.31 | 34.41 |
| TraesCS6A01G316900.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 53.3 | 33.87 |
| Solyc04g074430.1.1 | Tomato | nucleus | 20.3 | 30.3 |
| Os02t0756200-02 | Rice | extracellular | 42.13 | 26.95 |
| EES05498 | Sorghum | endoplasmic reticulum, vacuole | 38.07 | 24.19 |
| GSMUA_Achr7P12690_001 | Banana | extracellular | 24.87 | 23.56 |
| HORVU6Hr1G077780.1 | Barley | endoplasmic reticulum, extracellular | 29.44 | 18.41 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane | 23.35 | 17.69 |
| HORVU6Hr1G077770.1 | Barley | mitochondrion, plastid | 31.98 | 15.18 |
| Solyc04g074410.1.1 | Tomato | nucleus | 23.35 | 14.74 |
| PGSC0003DMT400079157 | Potato | endoplasmic reticulum, vacuole | 23.35 | 14.74 |
| Solyc04g074450.1.1 | Tomato | extracellular | 22.84 | 14.33 |
| PGSC0003DMT400079208 | Potato | endoplasmic reticulum, vacuole | 22.84 | 14.15 |
| PGSC0003DMT400079209 | Potato | extracellular | 22.34 | 14.06 |
| HORVU6Hr1G077750.1 | Barley | endoplasmic reticulum, extracellular | 22.34 | 13.97 |
| VIT_18s0001g06020.t01 | Wine grape | endoplasmic reticulum, vacuole | 22.34 | 13.84 |
| VIT_18s0001g06170.t01 | Wine grape | endoplasmic reticulum, vacuole | 22.34 | 13.84 |
| PGSC0003DMT400079207 | Potato | endoplasmic reticulum, vacuole | 22.34 | 13.84 |
| PGSC0003DMT400079158 | Potato | endoplasmic reticulum, vacuole | 21.83 | 13.83 |
| Solyc04g074440.1.1 | Tomato | nucleus | 21.83 | 13.65 |
| KRH53041 | Soybean | nucleus | 22.34 | 13.58 |
| KRH16765 | Soybean | nucleus | 21.32 | 13.42 |
| PGSC0003DMT400079206 | Potato | endoplasmic reticulum, extracellular | 21.32 | 13.21 |
| VIT_18s0001g06150.t01 | Wine grape | vacuole | 21.32 | 13.17 |
| KRH16766 | Soybean | nucleus | 20.81 | 13.06 |
| AT1G35140.1 | Thale cress | extracellular | 20.3 | 12.95 |
| AT4G08950.1 | Thale cress | extracellular, vacuole | 20.3 | 12.74 |
| KRH53040 | Soybean | nucleus | 19.8 | 12.66 |
| CDX90701 | Canola | endoplasmic reticulum, vacuole | 19.8 | 12.54 |
| Bra000660.1-P | Field mustard | endoplasmic reticulum, vacuole | 19.8 | 12.42 |
| HORVU7Hr1G036710.2 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 19.8 | 12.26 |
| CDY05033 | Canola | endoplasmic reticulum, vacuole | 19.29 | 12.1 |
| PGSC0003DMT400079159 | Potato | vacuole | 19.29 | 11.8 |
| KRH62324 | Soybean | nucleus | 21.83 | 11.38 |
| KRH62323 | Soybean | plastid | 20.3 | 11.24 |
| HORVU5Hr1G011440.2 | Barley | endoplasmic reticulum, plasma membrane | 17.77 | 11.11 |
| KRH72378 | Soybean | nucleus | 17.26 | 10.86 |
| HORVU7Hr1G036780.8 | Barley | golgi | 19.29 | 10.8 |
| HORVU2Hr1G049410.1 | Barley | extracellular, peroxisome | 13.2 | 6.88 |
| HORVU7Hr1G014410.3 | Barley | plastid | 13.71 | 6.07 |
| HORVU3Hr1G007150.2 | Barley | extracellular | 1.02 | 1.28 |
| HORVU4Hr1G033560.1 | Barley | cytosol, extracellular | 0.0 | 0.0 |
| Solyc04g074420.1.1 | Tomato | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G077820.1 | EnsemblPlantsGene:HORVU6Hr1G077820 | InterPro:EXORDIUM-like | PANTHER:PTHR31279 | PANTHER:PTHR31279:SF14 | PFAM:PF04674 |
| SEG:seg | SignalP:SignalP-noTM | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chrchr6H:+:532260147..532260770
Molecular Weight (calculated)
12390.9 Da
IEP (calculated)
5.572
GRAVY (calculated)
0.156
Length
197 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMIALVVTM VLSLAQLSAG SRRLMELYVP PESDRLTYHQ GGVLSGDIPV SILWYGKFTP AQRSIVSDFV VSLNSAPNGA ATPSVGQWWG AIEQLYLSKA
101: AAANGQAGGT XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXD LDAHIGS
101: AAANGQAGGT XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXD LDAHIGS
001: MASFVMGYFL LFAVAFMCLD ARTDKTQDYT SFQYHKGALL TGDVSINLIW YGKFKPSQRA IVTDFVASLS SSRRSTMAQN PSVATWWKTV EKYYQFRKMT
101: TTRGLSLSLG EQILDQGYSM GKSLTEKNLK DLAAKGGQSY AVNVVLTSAD VTVQGFCMNR CGSHGTGSGS GKKGSRFAYI WVGNSETQCP GQCAWPFHAP
201: VYGPQSPPLV APNNDVGLDG MVINLASLMA ATATNPFGDG YYQGPKTAPL EAGSACTGVY GKGSYPGYAG ELLVDATTGG SYNVKGLNGR KYLLPALFDP
301: KTDSCSTLF
101: TTRGLSLSLG EQILDQGYSM GKSLTEKNLK DLAAKGGQSY AVNVVLTSAD VTVQGFCMNR CGSHGTGSGS GKKGSRFAYI WVGNSETQCP GQCAWPFHAP
201: VYGPQSPPLV APNNDVGLDG MVINLASLMA ATATNPFGDG YYQGPKTAPL EAGSACTGVY GKGSYPGYAG ELLVDATTGG SYNVKGLNGR KYLLPALFDP
301: KTDSCSTLF
Arabidopsis Description
EXL1Protein EXORDIUM-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6E4]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.