Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G316900.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 97.42 | 97.42 |
| TraesCS6D01G296400.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 96.77 | 96.46 |
| HORVU6Hr1G077790.1 | Barley | endoplasmic reticulum, extracellular | 94.84 | 94.84 |
| Os02t0756200-02 | Rice | extracellular | 78.71 | 79.22 |
| EES05498 | Sorghum | endoplasmic reticulum, vacuole | 74.19 | 74.19 |
| Solyc04g074420.1.1 | Tomato | nucleus | 19.03 | 66.29 |
| TraesCS6B01G347200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 65.48 | 63.84 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane | 52.58 | 62.69 |
| TraesCS6B01G347300.1 | Wheat | endoplasmic reticulum, extracellular | 61.61 | 60.63 |
| TraesCS7B01G084300.1 | Wheat | extracellular, golgi | 60.97 | 58.51 |
| GSMUA_Achr7P12690_001 | Banana | extracellular | 39.03 | 58.17 |
| TraesCS7B01G084100.1 | Wheat | extracellular | 60.0 | 57.59 |
| KRH16765 | Soybean | nucleus | 57.1 | 56.55 |
| HORVU6Hr1G077820.1 | Barley | endoplasmic reticulum | 34.84 | 54.82 |
| VIT_18s0001g06150.t01 | Wine grape | vacuole | 55.81 | 54.23 |
| Solyc04g074410.1.1 | Tomato | nucleus | 54.52 | 54.17 |
| PGSC0003DMT400079157 | Potato | endoplasmic reticulum, vacuole | 54.52 | 54.17 |
| VIT_18s0001g06170.t01 | Wine grape | endoplasmic reticulum, vacuole | 55.48 | 54.09 |
| KRH16766 | Soybean | nucleus | 54.52 | 53.82 |
| VIT_18s0001g06020.t01 | Wine grape | endoplasmic reticulum, vacuole | 55.16 | 53.77 |
| Solyc04g074450.1.1 | Tomato | extracellular | 54.19 | 53.5 |
| PGSC0003DMT400079209 | Potato | extracellular | 53.87 | 53.35 |
| KRH53040 | Soybean | nucleus | 52.58 | 52.92 |
| PGSC0003DMT400079158 | Potato | endoplasmic reticulum, vacuole | 52.9 | 52.73 |
| PGSC0003DMT400079207 | Potato | endoplasmic reticulum, vacuole | 53.87 | 52.52 |
| KRH53041 | Soybean | nucleus | 54.84 | 52.47 |
| PGSC0003DMT400079208 | Potato | endoplasmic reticulum, vacuole | 53.55 | 52.2 |
| KRH72378 | Soybean | nucleus | 52.58 | 52.08 |
| Solyc04g074440.1.1 | Tomato | nucleus | 52.9 | 52.06 |
| PGSC0003DMT400079206 | Potato | endoplasmic reticulum, extracellular | 53.23 | 51.89 |
| PGSC0003DMT400079159 | Potato | vacuole | 53.55 | 51.55 |
| TraesCS6B01G347100.1 | Wheat | endoplasmic reticulum, extracellular | 50.97 | 51.13 |
| CDX90701 | Canola | endoplasmic reticulum, vacuole | 51.29 | 51.13 |
| AT4G08950.1 | Thale cress | extracellular, vacuole | 51.61 | 50.96 |
| Bra000660.1-P | Field mustard | endoplasmic reticulum, vacuole | 51.29 | 50.64 |
| CDY05033 | Canola | endoplasmic reticulum, vacuole | 50.97 | 50.32 |
| AT1G35140.1 | Thale cress | extracellular | 49.68 | 49.84 |
| TraesCS7B01G083900.1 | Wheat | endoplasmic reticulum, vacuole | 49.68 | 48.43 |
| Solyc04g074430.1.1 | Tomato | nucleus | 19.68 | 46.21 |
| KRH62323 | Soybean | plastid | 52.58 | 45.79 |
| TraesCS5B01G052300.1 | Wheat | vacuole | 46.45 | 44.72 |
| KRH62324 | Soybean | nucleus | 53.87 | 44.18 |
| TraesCS2B01G237800.1 | Wheat | extracellular, plasma membrane | 33.55 | 31.42 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G347400.1 | EnsemblPlantsGene:TraesCS6B01G347400 | InterPro:EXORDIUM-like | PANTHER:PTHR31279 | PANTHER:PTHR31279:SF14 | PFAM:PF04674 |
| SEG:seg | SignalP:SignalP-noTM | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr6B:+:611698300..611699494
Molecular Weight (calculated)
31878.8 Da
IEP (calculated)
4.928
GRAVY (calculated)
0.099
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MATIALIVAM VLSLAQLSAG SRRLMELYVP PESDRLTYHQ GGVLSGDIPV SILWYGKFTP AQRSIVSDFV VSLNSAPNGA ATPSVGQWWG TIEQLYLSKA
101: AAANGQAGAT HVLLAEQVTD EQCSLGTSLT LAQIDQLAAS VGAKKGGIAL VFTDEDVAVE GFCSSRCGRH GSSTGGDSTH IWVGNSVKQC PGQCAWPFAQ
201: PQYGPQGAPL VAPNGNVGMD GMVMVLATMV AGTVSNPYGD GYYQGPKGAS LEACTACPGV YGSGAYPGYA GNLLLDPSTG ASYNANGANG RKYLLPALYD
301: PATASCNTLV
101: AAANGQAGAT HVLLAEQVTD EQCSLGTSLT LAQIDQLAAS VGAKKGGIAL VFTDEDVAVE GFCSSRCGRH GSSTGGDSTH IWVGNSVKQC PGQCAWPFAQ
201: PQYGPQGAPL VAPNGNVGMD GMVMVLATMV AGTVSNPYGD GYYQGPKGAS LEACTACPGV YGSGAYPGYA GNLLLDPSTG ASYNANGANG RKYLLPALYD
301: PATASCNTLV
001: MASFVMGYFL LFAVAFMCLD ARTDKTQDYT SFQYHKGALL TGDVSINLIW YGKFKPSQRA IVTDFVASLS SSRRSTMAQN PSVATWWKTV EKYYQFRKMT
101: TTRGLSLSLG EQILDQGYSM GKSLTEKNLK DLAAKGGQSY AVNVVLTSAD VTVQGFCMNR CGSHGTGSGS GKKGSRFAYI WVGNSETQCP GQCAWPFHAP
201: VYGPQSPPLV APNNDVGLDG MVINLASLMA ATATNPFGDG YYQGPKTAPL EAGSACTGVY GKGSYPGYAG ELLVDATTGG SYNVKGLNGR KYLLPALFDP
301: KTDSCSTLF
101: TTRGLSLSLG EQILDQGYSM GKSLTEKNLK DLAAKGGQSY AVNVVLTSAD VTVQGFCMNR CGSHGTGSGS GKKGSRFAYI WVGNSETQCP GQCAWPFHAP
201: VYGPQSPPLV APNNDVGLDG MVINLASLMA ATATNPFGDG YYQGPKTAPL EAGSACTGVY GKGSYPGYAG ELLVDATTGG SYNVKGLNGR KYLLPALFDP
301: KTDSCSTLF
Arabidopsis Description
EXL1Protein EXORDIUM-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6E4]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.