Factsheet for TraesCS6B01G347100.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G296100.1	Wheat	endoplasmic reticulum, extracellular	97.73	97.11
TraesCS6A01G316600.1	Wheat	endoplasmic reticulum, extracellular	97.41	96.78
HORVU6Hr1G077750.1	Barley	endoplasmic reticulum, extracellular	93.53	91.75
Os02t0757100-01	Rice	extracellular	84.79	84.24
EES07217	Sorghum	endoplasmic reticulum, extracellular	80.26	79.74
Zm00001d018107_P001	Maize	endoplasmic reticulum, extracellular	79.29	78.03
Zm00001d052205_P001	Maize	extracellular	79.29	77.78
Solyc04g074420.1.1	Tomato	nucleus	20.71	71.91
GSMUA_Achr10P...	Banana	cytosol, extracellular, plastid	48.54	69.12
GSMUA_Achr7P12680_001	Banana	endoplasmic reticulum, extracellular	55.02	66.15
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular	47.9	64.07
KRH53040	Soybean	nucleus	58.25	58.44
VIT_18s0001g06150.t01	Wine grape	vacuole	60.19	58.31
KRH53041	Soybean	nucleus	60.84	58.02
Solyc04g074410.1.1	Tomato	nucleus	58.58	58.01
VIT_18s0001g06020.t01	Wine grape	endoplasmic reticulum, vacuole	59.55	57.86
VIT_18s0001g06170.t01	Wine grape	endoplasmic reticulum, vacuole	59.22	57.55
PGSC0003DMT400079157	Potato	endoplasmic reticulum, vacuole	57.93	57.37
PGSC0003DMT400079158	Potato	endoplasmic reticulum, vacuole	57.61	57.23
KRH16765	Soybean	nucleus	57.93	57.19
Solyc04g074440.1.1	Tomato	nucleus	57.93	56.83
Solyc04g074450.1.1	Tomato	extracellular	57.61	56.69
PGSC0003DMT400079206	Potato	endoplasmic reticulum, extracellular	58.25	56.6
PGSC0003DMT400079207	Potato	endoplasmic reticulum, vacuole	58.25	56.6
AT1G35140.1	Thale cress	extracellular	56.31	56.31
PGSC0003DMT400079208	Potato	endoplasmic reticulum, vacuole	57.93	56.29
PGSC0003DMT400079209	Potato	extracellular	56.96	56.23
CDX90701	Canola	endoplasmic reticulum, vacuole	56.31	55.95
Bra000660.1-P	Field mustard	endoplasmic reticulum, vacuole	56.63	55.73
KRH16766	Soybean	nucleus	56.63	55.73
CDY05033	Canola	endoplasmic reticulum, vacuole	56.31	55.41
AT4G08950.1	Thale cress	extracellular, vacuole	55.99	55.1
KRH72378	Soybean	nucleus	55.34	54.63
TraesCS7B01G084300.1	Wheat	extracellular, golgi	56.96	54.49
TraesCS7B01G084100.1	Wheat	extracellular	56.63	54.18
TraesCS6B01G347200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	55.66	54.09
PGSC0003DMT400079159	Potato	vacuole	55.34	53.11
TraesCS6B01G347400.1	Wheat	endoplasmic reticulum, extracellular, vacuole	51.13	50.97
TraesCS6B01G347300.1	Wheat	endoplasmic reticulum, extracellular	50.81	49.84
KRH62323	Soybean	plastid	56.96	49.44
TraesCS7B01G083900.1	Wheat	endoplasmic reticulum, vacuole	50.81	49.37
KRH62324	Soybean	nucleus	59.55	48.68
Solyc04g074430.1.1	Tomato	nucleus	20.71	48.48
GSMUA_Achr7P12670_001	Banana	endoplasmic reticulum, extracellular	16.5	45.54
TraesCS5B01G052300.1	Wheat	vacuole	42.72	40.99
GSMUA_Achr6P30430_001	Banana	endoplasmic reticulum	29.77	35.25
TraesCS2B01G237800.1	Wheat	extracellular, plasma membrane	34.63	32.33

Protein Annotations

EnsemblPlants:TraesCS6B01G347100.1	EnsemblPlantsGene:TraesCS6B01G347100	InterPro:EXORDIUM-like	PANTHER:PTHR31279	PANTHER:PTHR31279:SF3	PFAM:PF04674
SEG:seg	SignalP:SignalP-noTM	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr6B:-:611460567..611461496

Molecular Weight (calculated)

32282.6 Da

IEP (calculated)

9.051

GRAVY (calculated)

0.087

Length

309 amino acids

Sequence
(BLAST)

001: MASFGSMAVA LVVCAMLLQT CAATRRLQAL VQEQPITMKY HKGALLSGRI AVNLVWYGNF SAPQRAIVTD FVSSLASASP APQPEPSVAT WFKTAQKYYA
101: SSKARFPALA LGSHVFDQSY SLGRRLRERD LVRLAARGGP SRAINVVLTA DDVAVDGFCM SRCGSHGASP RSRAGRFAYV WVGNPATQCA GQCAWPFHQP
201: QYGPQTAPLA PPNGDVGVDG MVVSLASMIV GTVTNPFGNG FFQGPAEAPL EAATACAGVY GKGAYPGYAG SLLVDPATGA SFNANGAHGR KYLVPALVDP
301: DTSTCSTLG

Best Arabidopsis Sequence Match ( AT4G08950.1 )
(BLAST)

001: MYLLVFKLFL FLSLLQISVS ARNLASQEPN QFQLLKYHKG ALLSGKISVN LIWYGKFKPS QRAIISDFIT SLTHTSPTSK TLHQPSVATW WKTTEKYYKL
101: ATPSKNSSPL SLTLGKQIID ESCSLGKSLT DKKIQTLASK GDQRNAINVV LTSADVTVTG FGMSRCGTHG HARGLGKRGS KFAYIWVGNS ETQCPGQCAW
201: PFHAPVYGPQ SPPLVAPNND VGLDGMVINL ASLLAGTATN PFGNGYYQGP QNAPLEAASA CPGVYGKGAY PGYAGDLLVD TTTGGSFNAY GANGRKFLLP
301: ALYDPTTSAC STMV

Arabidopsis Description

EXOProtein EXORDIUM [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPE7]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.