Factsheet for TraesCS2B01G237800.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G218500.1	Wheat	extracellular	98.79	98.79
TraesCS2A01G212700.1	Wheat	extracellular	98.79	98.79
Os07t0496700-01	Rice	extracellular	84.59	85.63
HORVU2Hr1G049410.1	Barley	extracellular, peroxisome	96.68	84.66
Zm00001d021544_P001	Maize	extracellular, vacuole	85.5	83.48
EER99411	Sorghum	vacuole	84.89	82.16
GSMUA_Achr11P...	Banana	cytosol, extracellular, plastid	55.59	63.67
VIT_01s0011g01920.t01	Wine grape	vacuole	56.8	56.29
PGSC0003DMT400093900	Potato	mitochondrion	54.08	52.96
CDY31668	Canola	endoplasmic reticulum, vacuole	49.85	51.4
Bra005364.1-P	Field mustard	endoplasmic reticulum, vacuole	49.85	51.4
AT2G35150.1	Thale cress	extracellular	49.55	50.77
CDX84257	Canola	extracellular, vacuole	48.94	50.47
GSMUA_Achr10P...	Banana	nucleus	39.27	41.4
TraesCS6B01G347200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	35.95	37.42
TraesCS5B01G052300.1	Wheat	vacuole	34.44	35.4
TraesCS6B01G347100.1	Wheat	endoplasmic reticulum, extracellular	32.33	34.63
TraesCS6B01G347400.1	Wheat	endoplasmic reticulum, extracellular, vacuole	31.42	33.55
TraesCS7B01G084300.1	Wheat	extracellular, golgi	32.33	33.13
TraesCS6B01G347300.1	Wheat	endoplasmic reticulum, extracellular	31.42	33.02
TraesCS7B01G083900.1	Wheat	endoplasmic reticulum, vacuole	31.12	32.39
TraesCS7B01G084100.1	Wheat	extracellular	31.42	32.2

Protein Annotations

EnsemblPlants:TraesCS2B01G237800.1	EnsemblPlantsGene:TraesCS2B01G237800	InterPro:EXORDIUM-like	PANTHER:PTHR31279	PANTHER:PTHR31279:SF18	PFAM:PF04674
SEG:seg	SignalP:SignalP-noTM	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr2B:-:238607294..238608289

Molecular Weight (calculated)

35105.6 Da

IEP (calculated)

4.814

GRAVY (calculated)

0.147

Length

331 amino acids

Sequence
(BLAST)

001: MGTLLPCHPT LTLLPLLFAA AIVGVRCAPV YRPEYLVDGN QLVNMQYHMG PVVSGAPTNL FLIWYGRWEA PAQAVLRDFL ASLSAPAPFP AVSDWWARTP
101: RLYTDQSGAN VTATFAIAGE HSDAGYSHGA SLKRIDMQSI IRTAVVAYPD PLPLDPYNGV YLVLSSPDVQ VEEFCRAMCG FHYFTFASVV GVTVPYAWVG
201: NSGSQCPGRC AYPFAAPEYG ASGQGVLRPP NGDPGVDGMV IVLGHELAEL ATNPLVNAWY AGDTPTAPTE IADLCLGVYG DGGGAGGFVG NVSHAADGSS
301: YNVNGVNGRR FLVQWLWNPV LGACYGPNSS N

Best Arabidopsis Sequence Match ( AT2G17230.1 )
(BLAST)

001: MSSPATTITF FFFFTLSSFF YITSSLQNNN NNKHTATVNS LNIPSAAAEI TLVNPKLPPR SLSLTSSKKF EGSSNLVHLR YHMGPVLSSS PINIYVIWYG
101: QWSRPHKSLI RDFLNSISDA KAPSPSVSEW WRTASLYTDQ TGSNVSRSVL IAGEYSDSKY SHGQHLTRLT IQEVIASAAR SASFPVDHKN GMYLVLTSHD
201: VTMQDFCRAV CGFHYFTFPS MVGYTMPYAW VGQSGKQCPE VCAYPFALPG YMGHGGPGEL RPPNGETGVD GMVSVIGHEL AEVVSNPLIN AWYAGEDPTA
301: PTEIGDLCEG LYGSGGGGGY IGQVMRDREG KTFNMNGKGG RKFLVQWIWN PNLKACSGPN SVD

Arabidopsis Description

EXL5Protein EXORDIUM-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SII5]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.