Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G347100.1 | Wheat | endoplasmic reticulum, extracellular | 97.11 | 97.73 |
| TraesCS6A01G316600.1 | Wheat | endoplasmic reticulum, extracellular | 96.78 | 96.78 |
| HORVU6Hr1G077750.1 | Barley | endoplasmic reticulum, extracellular | 92.6 | 91.43 |
| Os02t0757100-01 | Rice | extracellular | 84.24 | 84.24 |
| EES07217 | Sorghum | endoplasmic reticulum, extracellular | 79.1 | 79.1 |
| Zm00001d052205_P001 | Maize | extracellular | 79.1 | 78.1 |
| Zm00001d018107_P001 | Maize | endoplasmic reticulum, extracellular | 78.78 | 78.03 |
| Solyc04g074420.1.1 | Tomato | nucleus | 20.26 | 70.79 |
| GSMUA_Achr10P... | Banana | cytosol, extracellular, plastid | 47.91 | 68.66 |
| GSMUA_Achr7P12680_001 | Banana | endoplasmic reticulum, extracellular | 53.7 | 64.98 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, extracellular | 47.27 | 63.64 |
| VIT_18s0001g06150.t01 | Wine grape | vacuole | 60.45 | 58.93 |
| KRH53040 | Soybean | nucleus | 57.88 | 58.44 |
| VIT_18s0001g06020.t01 | Wine grape | endoplasmic reticulum, vacuole | 59.49 | 58.18 |
| KRH53041 | Soybean | nucleus | 60.45 | 58.02 |
| VIT_18s0001g06170.t01 | Wine grape | endoplasmic reticulum, vacuole | 59.16 | 57.86 |
| KRH16765 | Soybean | nucleus | 58.2 | 57.83 |
| Solyc04g074410.1.1 | Tomato | nucleus | 57.88 | 57.69 |
| PGSC0003DMT400079157 | Potato | endoplasmic reticulum, vacuole | 57.56 | 57.37 |
| Solyc04g074450.1.1 | Tomato | extracellular | 57.23 | 56.69 |
| AT1G35140.1 | Thale cress | extracellular | 56.27 | 56.63 |
| PGSC0003DMT400079206 | Potato | endoplasmic reticulum, extracellular | 57.88 | 56.6 |
| PGSC0003DMT400079207 | Potato | endoplasmic reticulum, vacuole | 57.88 | 56.6 |
| CDX90701 | Canola | endoplasmic reticulum, vacuole | 56.59 | 56.59 |
| PGSC0003DMT400079158 | Potato | endoplasmic reticulum, vacuole | 56.59 | 56.59 |
| Solyc04g074440.1.1 | Tomato | nucleus | 57.23 | 56.51 |
| Bra000660.1-P | Field mustard | endoplasmic reticulum, vacuole | 56.91 | 56.37 |
| PGSC0003DMT400079208 | Potato | endoplasmic reticulum, vacuole | 57.56 | 56.29 |
| PGSC0003DMT400079209 | Potato | extracellular | 56.59 | 56.23 |
| CDY05033 | Canola | endoplasmic reticulum, vacuole | 56.59 | 56.05 |
| KRH16766 | Soybean | nucleus | 56.27 | 55.73 |
| TraesCS7D01G180300.1 | Wheat | extracellular | 57.23 | 55.62 |
| AT4G08950.1 | Thale cress | extracellular, vacuole | 55.95 | 55.41 |
| TraesCS7D01G180400.1 | Wheat | extracellular | 56.91 | 55.31 |
| TraesCS7D01G180600.1 | Wheat | extracellular | 56.91 | 55.14 |
| KRH72378 | Soybean | nucleus | 55.31 | 54.95 |
| PGSC0003DMT400079159 | Potato | vacuole | 55.95 | 54.04 |
| TraesCS6D01G296200.1 | Wheat | endoplasmic reticulum | 54.98 | 52.94 |
| TraesCS6D01G296400.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 51.13 | 51.13 |
| TraesCS7D01G180500.1 | Wheat | extracellular | 50.48 | 50.16 |
| TraesCS7D01G180100.1 | Wheat | endoplasmic reticulum, plasma membrane | 50.8 | 49.69 |
| KRH62323 | Soybean | plastid | 56.59 | 49.44 |
| TraesCS6D01G296300.1 | Wheat | extracellular, plasma membrane | 49.84 | 49.21 |
| KRH62324 | Soybean | nucleus | 59.16 | 48.68 |
| Solyc04g074430.1.1 | Tomato | nucleus | 20.58 | 48.48 |
| GSMUA_Achr7P12670_001 | Banana | endoplasmic reticulum, extracellular | 16.08 | 44.64 |
| TraesCS5D01G058000.1 | Wheat | extracellular | 41.8 | 40.0 |
| GSMUA_Achr6P30430_001 | Banana | endoplasmic reticulum | 29.26 | 34.87 |
| TraesCS2D01G218500.1 | Wheat | extracellular | 35.05 | 32.93 |
| TraesCS7D01G067100.1 | Wheat | vacuole | 33.76 | 30.35 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G296100.1 | EnsemblPlantsGene:TraesCS6D01G296100 | InterPro:EXORDIUM-like | PANTHER:PTHR31279 | PANTHER:PTHR31279:SF3 | PFAM:PF04674 |
| SEG:seg | SignalP:SignalP-noTM | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr6D:-:407469873..407471044
Molecular Weight (calculated)
32478.9 Da
IEP (calculated)
9.222
GRAVY (calculated)
0.119
Length
311 amino acids
Sequence
(BLAST)
(BLAST)
001: MASFGSIAVA LVVCAMLLQT CVATRRLQAL VQEQPITMKY HKGALLSGRI AINLVWYGNF SAPQRAIVTD FVSSLASASA SPAPQPEPSV ATWFKTAQKY
101: YASSKARFPA LALGSHVFDR SYSLGRRLRE RDLVRLAARG GPSRAINVVL TADDVAVDGF CMSRCGSHGA SPRSRAGRFA YVWVGNPATQ CAGQCAWPFH
201: QPQYGPQMAP LAPPNGDVGV DGMVVSLASM VVGTVTNPFG NGFFQGPAEA PLEAATACAG VYGKGAYPGY AGSLLVDPAT GASFNANGAH GRKYLVPALV
301: DPDTSACSTL G
101: YASSKARFPA LALGSHVFDR SYSLGRRLRE RDLVRLAARG GPSRAINVVL TADDVAVDGF CMSRCGSHGA SPRSRAGRFA YVWVGNPATQ CAGQCAWPFH
201: QPQYGPQMAP LAPPNGDVGV DGMVVSLASM VVGTVTNPFG NGFFQGPAEA PLEAATACAG VYGKGAYPGY AGSLLVDPAT GASFNANGAH GRKYLVPALV
301: DPDTSACSTL G
001: MYLLVFKLFL FLSLLQISVS ARNLASQEPN QFQLLKYHKG ALLSGKISVN LIWYGKFKPS QRAIISDFIT SLTHTSPTSK TLHQPSVATW WKTTEKYYKL
101: ATPSKNSSPL SLTLGKQIID ESCSLGKSLT DKKIQTLASK GDQRNAINVV LTSADVTVTG FGMSRCGTHG HARGLGKRGS KFAYIWVGNS ETQCPGQCAW
201: PFHAPVYGPQ SPPLVAPNND VGLDGMVINL ASLLAGTATN PFGNGYYQGP QNAPLEAASA CPGVYGKGAY PGYAGDLLVD TTTGGSFNAY GANGRKFLLP
301: ALYDPTTSAC STMV
101: ATPSKNSSPL SLTLGKQIID ESCSLGKSLT DKKIQTLASK GDQRNAINVV LTSADVTVTG FGMSRCGTHG HARGLGKRGS KFAYIWVGNS ETQCPGQCAW
201: PFHAPVYGPQ SPPLVAPNND VGLDGMVINL ASLLAGTATN PFGNGYYQGP QNAPLEAASA CPGVYGKGAY PGYAGDLLVD TTTGGSFNAY GANGRKFLLP
301: ALYDPTTSAC STMV
Arabidopsis Description
EXOProtein EXORDIUM [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPE7]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.