Factsheet for TraesCS5D01G058000.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G052300.1	Wheat	vacuole	96.31	97.2
TraesCS5A01G047400.1	Wheat	vacuole	96.92	96.92
TraesCS5A01G047700.1	Wheat	vacuole	96.62	96.62
HORVU5Hr1G011440.2	Barley	endoplasmic reticulum, plasma membrane	88.0	90.79
Zm00001d014318_P001	Maize	extracellular, plasma membrane	71.38	70.52
Os10t0376400-00	Rice	extracellular, plasma membrane	70.77	68.86
OQU91894	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	69.85	60.53
GSMUA_Achr8P17620_001	Banana	endoplasmic reticulum, extracellular	39.38	49.23
TraesCS6D01G296200.1	Wheat	endoplasmic reticulum	46.15	46.44
TraesCS6D01G296300.1	Wheat	extracellular, plasma membrane	44.92	46.35
TraesCS7D01G180500.1	Wheat	extracellular	44.62	46.33
TraesCS6D01G296400.1	Wheat	endoplasmic reticulum, extracellular, vacuole	43.69	45.66
TraesCS7D01G180100.1	Wheat	endoplasmic reticulum, plasma membrane	44.62	45.6
VIT_18s0001g06140.t01	Wine grape	endoplasmic reticulum, plasma membrane	44.31	45.57
TraesCS7D01G180600.1	Wheat	extracellular	44.92	45.48
Solyc04g074400.1.1	Tomato	nucleus	43.08	45.31
PGSC0003DMT400079205	Potato	endoplasmic reticulum, vacuole	43.08	45.31
TraesCS7D01G180300.1	Wheat	extracellular	44.0	44.69
TraesCS7D01G180400.1	Wheat	extracellular	43.69	44.38
TraesCS6D01G296100.1	Wheat	endoplasmic reticulum, extracellular	40.0	41.8
TraesCS2D01G218500.1	Wheat	extracellular	34.46	33.84
TraesCS7D01G067100.1	Wheat	vacuole	33.85	31.79

Protein Annotations

EnsemblPlants:TraesCS5D01G058000.1	EnsemblPlantsGene:TraesCS5D01G058000	InterPro:EXORDIUM-like	PANTHER:PTHR31279	PANTHER:PTHR31279:SF10	PFAM:PF04674
SEG:seg	SignalP:SignalP-noTM	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr5D:+:54784870..54786069

Molecular Weight (calculated)

33419.9 Da

IEP (calculated)

8.324

GRAVY (calculated)

0.060

Length

325 amino acids

Sequence
(BLAST)

001: MTMSKPHAAC SLLLALLIGL TRPSPCTSSL YNPPPPDMTY HHGGVLDSTV PVSVLYYGAF SPHHKAVLAD FLRSLSPRSR PHTFGAPAAA SSASVAQWWE
101: TVDRYVQRTG RERTRVMLTN QVSDEGCSLG KHLSRLQVEQ LAARLGVAPG GVAVVLTAAD VAVDGFCGSS CGLHGSLAPG GAVHVWVGNA AVQCPGRCAW
201: PFHAADPAAA ATAGPGRHRS GETPLRAPNG DAGVDGMVIN LAALLAGAVT NPYGHGYFQG DAGAPVEVGG GCPGVYGRGA YPGYPGAVKL DTATAGGYNV
301: VGRNGRRYLV PALLDPANYS CLVMA

Best Arabidopsis Sequence Match ( AT1G35140.1 )
(BLAST)

001: MASFVMGYFL LFAVAFMCLD ARTDKTQDYT SFQYHKGALL TGDVSINLIW YGKFKPSQRA IVTDFVASLS SSRRSTMAQN PSVATWWKTV EKYYQFRKMT
101: TTRGLSLSLG EQILDQGYSM GKSLTEKNLK DLAAKGGQSY AVNVVLTSAD VTVQGFCMNR CGSHGTGSGS GKKGSRFAYI WVGNSETQCP GQCAWPFHAP
201: VYGPQSPPLV APNNDVGLDG MVINLASLMA ATATNPFGDG YYQGPKTAPL EAGSACTGVY GKGSYPGYAG ELLVDATTGG SYNVKGLNGR KYLLPALFDP
301: KTDSCSTLF

Arabidopsis Description

EXL1Protein EXORDIUM-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6E4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.