Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 6
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g074400.1.1 | Tomato | nucleus | 94.82 | 94.82 |
| VIT_18s0001g06140.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 64.4 | 62.97 |
| GSMUA_Achr8P17620_001 | Banana | endoplasmic reticulum, extracellular | 45.31 | 53.85 |
| PGSC0003DMT400079157 | Potato | endoplasmic reticulum, vacuole | 54.37 | 53.85 |
| PGSC0003DMT400079209 | Potato | extracellular | 54.37 | 53.67 |
| PGSC0003DMT400079159 | Potato | vacuole | 55.34 | 53.11 |
| PGSC0003DMT400079158 | Potato | endoplasmic reticulum, vacuole | 53.4 | 53.05 |
| PGSC0003DMT400032756 | Potato | extracellular | 51.46 | 52.82 |
| PGSC0003DMT400079208 | Potato | endoplasmic reticulum, vacuole | 54.05 | 52.52 |
| PGSC0003DMT400079207 | Potato | endoplasmic reticulum, vacuole | 53.72 | 52.2 |
| PGSC0003DMT400079206 | Potato | endoplasmic reticulum, extracellular | 53.72 | 52.2 |
| PGSC0003DMT400079160 | Potato | extracellular, golgi | 45.31 | 45.31 |
| Zm00001d014318_P001 | Maize | extracellular, plasma membrane | 47.9 | 44.98 |
| HORVU5Hr1G011440.2 | Barley | endoplasmic reticulum, plasma membrane | 45.31 | 44.44 |
| TraesCS5B01G052300.1 | Wheat | vacuole | 44.98 | 43.17 |
| TraesCS5D01G058000.1 | Wheat | extracellular | 45.31 | 43.08 |
| Os10t0376400-00 | Rice | extracellular, plasma membrane | 45.95 | 42.52 |
| TraesCS5A01G047700.1 | Wheat | vacuole | 44.66 | 42.46 |
| TraesCS5A01G047400.1 | Wheat | vacuole | 44.34 | 42.15 |
| OQU91894 | Sorghum | cytosol, endoplasmic reticulum, plasma membrane | 46.93 | 38.67 |
| PGSC0003DMT400038389 | Potato | cytosol | 11.65 | 35.64 |
| PGSC0003DMT400093900 | Potato | mitochondrion | 34.3 | 31.36 |
| PGSC0003DMT400043340 | Potato | extracellular | 33.66 | 29.55 |
| PGSC0003DMT400072047 | Potato | extracellular, vacuole | 31.72 | 28.24 |
| PGSC0003DMT400072046 | Potato | extracellular, vacuole | 31.72 | 28.24 |
| PGSC0003DMT400059235 | Potato | endoplasmic reticulum, plasma membrane | 30.74 | 27.22 |
| PGSC0003DMT400089791 | Potato | cytosol | 11.33 | 25.55 |
| PGSC0003DMT400095305 | Potato | cytosol | 8.74 | 21.95 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400079205 | EnsemblPlantsGene:PGSC0003DMG400030825 | EntrezGene:102592419 | InterPro:EXORDIUM-like | PANTHER:PTHR31279 | PANTHER:PTHR31279:SF6 |
| PFAM:PF04674 | PGSC:PGSC0003DMG400030825 | RefSeq:XP_006363313.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000296BA13 |
| UniProt:M1D1E7 | MapMan:35.1 | : | : | : | : |
Description
Phi-1 [Source:PGSC_GENE;Acc:PGSC0003DMG400030825]
Coordinates
chr4:-:63902927..63904004
Molecular Weight (calculated)
33541.1 Da
IEP (calculated)
8.914
GRAVY (calculated)
-0.130
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSFDYSKTP YPLLVLVFLS LLHITYGARN LFSLYRPPSM SLTYHNGDLL ESEIKISILW YGKFSPAQKS IIVDFLRSLN SPSKIWSRNT PTVTKWWQTI
101: QTYLTKADKK ETRLVLSNQF TDENCSIGKT LKKSQISELA HSKKGELILV LTAQDVAVEG FCMGNCGYHG SGQGKRSVFI WVGNSATQCP GQCAWPFHQP
201: IYGPQAKPLG APNGDVGADG MVVNIASLLA GVVTNPYGNG YYQGPAESPL EAASACAGLY GKKAYPGYAG ELLVDSITGA SYNAHGTNGR KYLLPGLFDP
301: NKSACSTIV
101: QTYLTKADKK ETRLVLSNQF TDENCSIGKT LKKSQISELA HSKKGELILV LTAQDVAVEG FCMGNCGYHG SGQGKRSVFI WVGNSATQCP GQCAWPFHQP
201: IYGPQAKPLG APNGDVGADG MVVNIASLLA GVVTNPYGNG YYQGPAESPL EAASACAGLY GKKAYPGYAG ELLVDSITGA SYNAHGTNGR KYLLPGLFDP
301: NKSACSTIV
001: MASFVMGYFL LFAVAFMCLD ARTDKTQDYT SFQYHKGALL TGDVSINLIW YGKFKPSQRA IVTDFVASLS SSRRSTMAQN PSVATWWKTV EKYYQFRKMT
101: TTRGLSLSLG EQILDQGYSM GKSLTEKNLK DLAAKGGQSY AVNVVLTSAD VTVQGFCMNR CGSHGTGSGS GKKGSRFAYI WVGNSETQCP GQCAWPFHAP
201: VYGPQSPPLV APNNDVGLDG MVINLASLMA ATATNPFGDG YYQGPKTAPL EAGSACTGVY GKGSYPGYAG ELLVDATTGG SYNVKGLNGR KYLLPALFDP
301: KTDSCSTLF
101: TTRGLSLSLG EQILDQGYSM GKSLTEKNLK DLAAKGGQSY AVNVVLTSAD VTVQGFCMNR CGSHGTGSGS GKKGSRFAYI WVGNSETQCP GQCAWPFHAP
201: VYGPQSPPLV APNNDVGLDG MVINLASLMA ATATNPFGDG YYQGPKTAPL EAGSACTGVY GKGSYPGYAG ELLVDATTGG SYNVKGLNGR KYLLPALFDP
301: KTDSCSTLF
Arabidopsis Description
EXL1Protein EXORDIUM-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6E4]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.