Skip to main content
crop-pal logo
Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 6
  • golgi 6
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:golgi
nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc04g074420.1.1 Tomato nucleus 22.22 80.9
KRH16765 Soybean nucleus 77.47 80.19
VIT_18s0001g06150.t01 Wine grape vacuole 78.09 79.31
KRH62324 Soybean nucleus 89.2 76.45
PGSC0003DMT400079157 Potato endoplasmic reticulum, vacuole 70.37 73.08
Solyc04g074450.1.1 Tomato extracellular 70.68 72.93
PGSC0003DMT400079209 Potato extracellular 70.37 72.84
KRH16766 Soybean nucleus 70.37 72.61
Solyc04g074410.1.1 Tomato nucleus 69.75 72.44
PGSC0003DMT400079207 Potato endoplasmic reticulum, vacuole 70.68 72.01
AT4G08950.1 Thale cress extracellular, vacuole 69.75 71.97
KRH72378 Soybean nucleus 69.44 71.89
PGSC0003DMT400079208 Potato endoplasmic reticulum, vacuole 70.37 71.7
CDX90701 Canola endoplasmic reticulum, vacuole 68.52 71.38
PGSC0003DMT400079158 Potato endoplasmic reticulum, vacuole 68.52 71.38
Bra000660.1-P Field mustard endoplasmic reticulum, vacuole 69.14 71.34
Solyc04g074440.1.1 Tomato nucleus 69.14 71.11
KRH53040 Soybean nucleus 67.59 71.1
PGSC0003DMT400079206 Potato endoplasmic reticulum, extracellular 69.44 70.75
CDY05033 Canola endoplasmic reticulum, vacuole 68.52 70.7
GSMUA_Achr10P... Banana cytosol, extracellular, plastid 43.83 65.44
GSMUA_Achr10P... Banana endoplasmic reticulum, extracellular 45.37 63.64
KRH18203 Soybean nucleus 59.26 63.37
Solyc04g074430.1.1 Tomato nucleus 25.31 62.12
Os02t0757100-01 Rice extracellular 59.57 62.06
KRH42138 Soybean nucleus 58.02 61.84
EES07217 Sorghum endoplasmic reticulum, extracellular 58.95 61.41
TraesCS6A01G316600.1 Wheat endoplasmic reticulum, extracellular 58.64 61.09
TraesCS6B01G347100.1 Wheat endoplasmic reticulum, extracellular 58.02 60.84
TraesCS6D01G296100.1 Wheat endoplasmic reticulum, extracellular 58.02 60.45
KRH62323 Soybean plastid 66.05 60.11
GSMUA_Achr7P12690_001 Banana extracellular 38.58 60.1
KRH43888 Soybean extracellular 54.32 59.66
GSMUA_Achr7P12680_001 Banana endoplasmic reticulum, extracellular 46.91 59.14
Zm00001d052205_P001 Maize extracellular 57.41 59.05
HORVU6Hr1G077750.1 Barley endoplasmic reticulum, extracellular 57.41 59.05
Zm00001d018107_P001 Maize endoplasmic reticulum, extracellular 57.1 58.92
KRH10561 Soybean extracellular 53.4 58.25
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane 46.6 58.08
KRH16767 Soybean extracellular, vacuole 56.17 57.59
KRH72379 Soybean extracellular, vacuole 55.86 57.28
Os06t0220000-01 Rice extracellular 49.69 56.89
Os02t0756200-02 Rice extracellular 53.7 56.49
TraesCSU01G264500.1 Wheat plastid 50.31 56.21
TraesCS6A01G316800.1 Wheat endoplasmic reticulum, extracellular, vacuole 54.63 56.19
TraesCS6B01G347300.1 Wheat endoplasmic reticulum, extracellular 54.63 56.19
TraesCS6A01G316900.1 Wheat endoplasmic reticulum, extracellular, vacuole 53.7 56.13
HORVU6Hr1G077790.1 Barley endoplasmic reticulum, extracellular 53.7 56.13
TraesCS6B01G347200.1 Wheat endoplasmic reticulum, extracellular, vacuole 54.94 55.97
HORVU6Hr1G077780.1 Barley endoplasmic reticulum, extracellular 54.32 55.87
TraesCS6D01G296300.1 Wheat extracellular, plasma membrane 54.32 55.87
TraesCS6A01G316700.1 Wheat endoplasmic reticulum 54.94 55.45
TraesCS6D01G296400.1 Wheat endoplasmic reticulum, extracellular, vacuole 53.09 55.31
EES05496 Sorghum golgi, vacuole 56.17 55.15
TraesCS6D01G296200.1 Wheat endoplasmic reticulum 54.94 55.11
TraesCS6B01G347400.1 Wheat endoplasmic reticulum, extracellular, vacuole 52.47 54.84
Os02t0756600-01 Rice extracellular 52.47 54.31
TraesCS7D01G180600.1 Wheat extracellular 53.7 54.21
TraesCS7A01G178400.1 Wheat extracellular 53.09 53.75
Os02t0756800-01 Rice extracellular 54.32 53.66
KRH62322 Soybean nucleus 52.16 53.65
TraesCS7B01G084300.1 Wheat extracellular, golgi 53.4 53.56
TraesCS7D01G180300.1 Wheat extracellular 52.78 53.44
Zm00001d018105_P001 Maize extracellular 51.85 53.33
TraesCS7B01G084100.1 Wheat extracellular 53.09 53.25
TraesCS7A01G178500.1 Wheat extracellular 53.09 53.25
Zm00001d052206_P001 Maize plastid 53.4 53.23
EES05498 Sorghum endoplasmic reticulum, vacuole 50.93 53.23
TraesCS7D01G180400.1 Wheat extracellular 52.47 53.12
Zm00001d044864_P001 Maize mitochondrion 53.09 52.44
KRH53039 Soybean extracellular 51.54 52.35
KXG30713 Sorghum golgi, vacuole 50.93 51.56
TraesCS7D01G180500.1 Wheat extracellular 49.69 51.44
EER88094 Sorghum endoplasmic reticulum, vacuole 53.4 51.18
Zm00001d037205_P001 Maize extracellular 52.47 50.6
Os06t0220200-00 Rice endoplasmic reticulum, extracellular, vacuole 47.84 48.29
EER89439 Sorghum extracellular 51.54 47.31
Os06t0220300-00 Rice extracellular 44.14 45.25
HORVU6Hr1G077770.1 Barley mitochondrion, plastid 54.63 42.65
GSMUA_Achr7P12670_001 Banana endoplasmic reticulum, extracellular 14.51 41.96
KRH65072 Soybean cytosol 13.89 36.89
KRH51406 Soybean plasma membrane, vacuole 32.41 34.88
KRH60707 Soybean plasma membrane, vacuole 31.48 34.58
KRG92438 Soybean nucleus 35.19 33.33
GSMUA_Achr6P30430_001 Banana endoplasmic reticulum 26.54 32.95
KRH40006 Soybean nucleus 34.88 32.47
KRH23788 Soybean nucleus 33.64 31.32
KRH34361 Soybean nucleus 35.49 29.95
Zm00001d018106_P001 Maize plastid 51.23 27.85
HORVU7Hr1G036780.8 Barley golgi 27.78 25.57
HORVU6Hr1G077820.1 Barley endoplasmic reticulum 13.58 22.34
Protein Annotations
EMBL:ACUP02003445EnsemblPlants:KRH53041EnsemblPlantsGene:GLYMA_06G102100EntrezGene:100794117InterPro:EXORDIUM-likePANTHER:PTHR31279
PANTHER:PTHR31279:SF3PFAM:PF04674ProteinID:KRH53041ProteinID:KRH53041.1SEG:segSignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI00023395A1UniProt:I1K9W9MapMan:35.1::
Description
hypothetical protein
Coordinates
chr6:-:8105536..8107435
Molecular Weight (calculated)
34709.1 Da
IEP (calculated)
8.709
GRAVY (calculated)
-0.121
Length
324 amino acids
Sequence
(BLAST)
001: MATLVLYQFF LKLLLLISVF QLSFAARRLN QLVQDQSQLL HYHNGPLLYG KIAVNLIWYG HFKPSQKAII TDFVTSLSSP SSQSSQPSVA TWWKTTEKYY
101: HLSPKNKKAA SSLSLSLGDQ FLDEGFSLGK SLTSKNLVEL ASKGGQRNAI NVVLTSADVA VEGFCMSRCG THGSSSSASH VKKNNNGKNY KFAYIWVGNS
201: ETQCPGQCAW PFHQPIYGPQ SPPLVAPNND VGLDGMVINL ASLLAGTATN PFGNGYFQGP AEAPLEAASA CPGVYGKGAY PGYAGNLLVD SATGASYNVE
301: GDNGRKYLVP ALYDPSTSSC STPV
Best Arabidopsis Sequence Match ( AT4G08950.1 )
(BLAST)
001: MYLLVFKLFL FLSLLQISVS ARNLASQEPN QFQLLKYHKG ALLSGKISVN LIWYGKFKPS QRAIISDFIT SLTHTSPTSK TLHQPSVATW WKTTEKYYKL
101: ATPSKNSSPL SLTLGKQIID ESCSLGKSLT DKKIQTLASK GDQRNAINVV LTSADVTVTG FGMSRCGTHG HARGLGKRGS KFAYIWVGNS ETQCPGQCAW
201: PFHAPVYGPQ SPPLVAPNND VGLDGMVINL ASLLAGTATN PFGNGYYQGP QNAPLEAASA CPGVYGKGAY PGYAGDLLVD TTTGGSFNAY GANGRKFLLP
301: ALYDPTTSAC STMV
Arabidopsis Description
EXOProtein EXORDIUM [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPE7]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.