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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 5
  • golgi 4
  • mitochondrion 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:mitochondrion
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:extracellular
extracellular: 24083427
msms PMID: 24083427 doi
T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu
Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G316800.1 Wheat endoplasmic reticulum, extracellular, vacuole 75.08 74.6
TraesCS6D01G296300.1 Wheat extracellular, plasma membrane 74.76 74.29
HORVU6Hr1G077780.1 Barley endoplasmic reticulum, extracellular 74.76 74.29
TraesCS6B01G347300.1 Wheat endoplasmic reticulum, extracellular 74.44 73.97
Solyc04g074420.1.1 Tomato nucleus 20.45 71.91
KXG30713 Sorghum golgi, vacuole 70.29 68.75
Os02t0756200-02 Rice extracellular 65.81 66.88
Os06t0220000-01 Rice extracellular 60.06 66.43
Zm00001d018105_P001 Maize extracellular 66.45 66.03
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane 53.04 63.85
Os02t0756800-01 Rice extracellular 66.77 63.72
GSMUA_Achr7P12690_001 Banana extracellular 40.58 61.06
Os06t0220200-00 Rice endoplasmic reticulum, extracellular, vacuole 55.27 53.89
KRH16765 Soybean nucleus 53.35 53.35
PGSC0003DMT400079158 Potato endoplasmic reticulum, vacuole 52.72 53.05
Solyc04g074450.1.1 Tomato extracellular 53.04 52.87
VIT_18s0001g06170.t01 Wine grape endoplasmic reticulum, vacuole 53.67 52.83
PGSC0003DMT400079209 Potato extracellular 52.72 52.72
KRH16766 Soybean nucleus 52.72 52.55
VIT_18s0001g06020.t01 Wine grape endoplasmic reticulum, vacuole 53.35 52.52
KRH53041 Soybean nucleus 54.31 52.47
Solyc04g074410.1.1 Tomato nucleus 52.08 52.24
PGSC0003DMT400079157 Potato endoplasmic reticulum, vacuole 52.08 52.24
PGSC0003DMT400079206 Potato endoplasmic reticulum, extracellular 52.72 51.89
CDX90701 Canola endoplasmic reticulum, vacuole 51.44 51.77
KRH72378 Soybean nucleus 51.76 51.76
AT4G08950.1 Thale cress extracellular, vacuole 51.76 51.59
Os06t0219900-01 Rice extracellular, plasma membrane, vacuole 51.44 51.27
Bra000660.1-P Field mustard endoplasmic reticulum, vacuole 51.44 51.27
PGSC0003DMT400079159 Potato vacuole 52.72 51.24
VIT_18s0001g06150.t01 Wine grape vacuole 52.08 51.1
CDY05033 Canola endoplasmic reticulum, vacuole 51.12 50.96
PGSC0003DMT400079207 Potato endoplasmic reticulum, vacuole 51.76 50.94
KRH53040 Soybean nucleus 49.84 50.65
PGSC0003DMT400079208 Potato endoplasmic reticulum, vacuole 51.12 50.31
Solyc04g074440.1.1 Tomato nucleus 50.48 50.16
Os02t0757100-01 Rice extracellular 49.52 49.84
AT1G35140.1 Thale cress extracellular 49.2 49.84
Os06t0220300-00 Rice extracellular 50.16 49.68
Os10t0376400-00 Rice extracellular, plasma membrane 48.24 45.21
KRH62324 Soybean nucleus 53.67 44.44
KRH62323 Soybean plastid 50.16 44.1
Solyc04g074430.1.1 Tomato nucleus 16.61 39.39
Os07t0496700-01 Rice extracellular 37.38 35.78
Zm00001d018106_P001 Maize plastid 66.45 34.9
Os06t0133600-01 Rice golgi, vacuole 35.46 31.9
Protein Annotations
EMBL:AK062900EnsemblPlants:Os02t0756600-01EnsemblPlantsGene:Os02g0756600EntrezGene:4330779InterPro:EXORDIUM-likePANTHER:PTHR31279
PANTHER:PTHR31279:SF11PFAM:PF04674ProteinID:BAD17078.1ProteinID:BAD17260.1ProteinID:BAF10083.1ProteinID:BAS80997.1
ProteinID:EAZ24676.1RefSeq:XP_015624091.1SEG:segSignalP:SignalP-noTMUniParc:UPI000035ADD1UniProt:Q6Z677
MapMan:35.1:::::
Description
Similar to Phi-1 protein. (Os02t0756600-01)
Coordinates
chr2:-:31835161..31836353
Molecular Weight (calculated)
32642.1 Da
IEP (calculated)
8.089
GRAVY (calculated)
0.076
Length
313 amino acids
Sequence
(BLAST)
001: MAAKAVMLAL LVLVSTAQVS MGARRRMELY KPDPADMLSY HSGAVLQGNI PVSIYWYGKF TPAQKSILFD FLLSLSVAPY AAAPSVAQWW SSIDELYLSK
101: AVQTNSNGQS KKTQVLVASQ VSDINCSMGK SLTLAQVAAL AAQAKPKKGG IALVFTAQDV TVEGFGMSRC GLHGSDAKSG TAYIWVGNPA TQCPGECAWP
201: FHQPMYGPQG APLVAPNGDI GADGMVMNLA SMLAGTVTNP FGDGYYQGSR DAPLEAATAC PGVFGSGAYP GFAGELKVDQ ATGASYNANG ANGRKYLLPA
301: LYNPSTGTCN TLV
Best Arabidopsis Sequence Match ( AT4G08950.1 )
(BLAST)
001: MYLLVFKLFL FLSLLQISVS ARNLASQEPN QFQLLKYHKG ALLSGKISVN LIWYGKFKPS QRAIISDFIT SLTHTSPTSK TLHQPSVATW WKTTEKYYKL
101: ATPSKNSSPL SLTLGKQIID ESCSLGKSLT DKKIQTLASK GDQRNAINVV LTSADVTVTG FGMSRCGTHG HARGLGKRGS KFAYIWVGNS ETQCPGQCAW
201: PFHAPVYGPQ SPPLVAPNND VGLDGMVINL ASLLAGTATN PFGNGYYQGP QNAPLEAASA CPGVYGKGAY PGYAGDLLVD TTTGGSFNAY GANGRKFLLP
301: ALYDPTTSAC STMV
Arabidopsis Description
EXOProtein EXORDIUM [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPE7]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.