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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 6
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
 nucleus: 21132161
nucleus: 28499913
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH72378 Soybean nucleus 89.81 90.1
KRH53040 Soybean nucleus 77.71 79.22
KRH16765 Soybean nucleus 70.38 70.61
KRH53041 Soybean nucleus 72.61 70.37
VIT_18s0001g06020.t01 Wine grape endoplasmic reticulum, vacuole 71.02 70.13
VIT_18s0001g06170.t01 Wine grape endoplasmic reticulum, vacuole 71.02 70.13
PGSC0003DMT400079159 Potato vacuole 69.75 68.01
KRH62323 Soybean plastid 75.16 66.29
AT1G35140.1 Thale cress extracellular 64.01 65.05
GSMUA_Achr10P... Banana endoplasmic reticulum, extracellular 47.13 64.07
GSMUA_Achr10P... Banana cytosol, extracellular, plastid 43.31 62.67
KRH18203 Soybean nucleus 58.28 60.4
KRH62324 Soybean nucleus 71.97 59.79
KRH42138 Soybean nucleus 57.64 59.54
KRH43888 Soybean extracellular 55.73 59.32
KRH10561 Soybean extracellular 56.05 59.26
EES07217 Sorghum endoplasmic reticulum, extracellular 57.32 57.88
TraesCS6A01G316600.1 Wheat endoplasmic reticulum, extracellular 56.69 57.23
GSMUA_Achr7P12680_001 Banana endoplasmic reticulum, extracellular 46.82 57.2
HORVU6Hr1G077790.1 Barley endoplasmic reticulum, extracellular 56.05 56.77
GSMUA_Achr7P12690_001 Banana extracellular 37.58 56.73
TraesCS6B01G347100.1 Wheat endoplasmic reticulum, extracellular 55.73 56.63
TraesCS6D01G296100.1 Wheat endoplasmic reticulum, extracellular 55.73 56.27
Os06t0220000-01 Rice extracellular 50.64 56.18
Os02t0756200-02 Rice extracellular 55.1 56.17
Os02t0757100-01 Rice extracellular 55.41 55.95
HORVU6Hr1G077750.1 Barley endoplasmic reticulum, extracellular 56.05 55.87
Zm00001d052205_P001 Maize extracellular 55.73 55.56
TraesCS6A01G316900.1 Wheat endoplasmic reticulum, extracellular, vacuole 54.78 55.48
Zm00001d018107_P001 Maize endoplasmic reticulum, extracellular 55.41 55.41
TraesCS6D01G296400.1 Wheat endoplasmic reticulum, extracellular, vacuole 54.78 55.31
KRH72379 Soybean extracellular, vacuole 55.41 55.06
KRH16767 Soybean extracellular, vacuole 55.1 54.75
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane 45.22 54.62
TraesCS6B01G347400.1 Wheat endoplasmic reticulum, extracellular, vacuole 53.82 54.52
TraesCSU01G264500.1 Wheat plastid 50.32 54.48
EES05498 Sorghum endoplasmic reticulum, vacuole 53.5 54.19
TraesCS6B01G347200.1 Wheat endoplasmic reticulum, extracellular, vacuole 54.78 54.09
TraesCS6A01G316700.1 Wheat endoplasmic reticulum 54.78 53.58
TraesCS6D01G296200.1 Wheat endoplasmic reticulum 54.78 53.25
KRH62322 Soybean nucleus 53.18 53.02
TraesCS7D01G180600.1 Wheat extracellular 54.14 52.96
EES05496 Sorghum golgi, vacuole 55.41 52.73
Os02t0756600-01 Rice extracellular 52.55 52.72
Os02t0756800-01 Rice extracellular 54.78 52.44
TraesCS7A01G178400.1 Wheat extracellular 53.18 52.19
TraesCS7D01G180300.1 Wheat extracellular 53.18 52.19
TraesCS7B01G084100.1 Wheat extracellular 53.5 52.01
Zm00001d052206_P001 Maize plastid 53.82 52.0
TraesCS7D01G180400.1 Wheat extracellular 52.87 51.88
TraesCS7B01G084300.1 Wheat extracellular, golgi 53.18 51.7
TraesCS7A01G178500.1 Wheat extracellular 53.18 51.7
KRH53039 Soybean extracellular 52.23 51.41
TraesCS7D01G180500.1 Wheat extracellular 50.96 51.12
TraesCS6D01G296300.1 Wheat extracellular, plasma membrane 50.96 50.79
TraesCS6A01G316800.1 Wheat endoplasmic reticulum, extracellular, vacuole 50.32 50.16
TraesCS6B01G347300.1 Wheat endoplasmic reticulum, extracellular 50.32 50.16
EER88094 Sorghum endoplasmic reticulum, vacuole 53.82 50.0
HORVU6Hr1G077780.1 Barley endoplasmic reticulum, extracellular 50.0 49.84
Zm00001d037205_P001 Maize extracellular 52.87 49.4
Zm00001d044864_P001 Maize mitochondrion 51.59 49.39
Zm00001d018105_P001 Maize extracellular 49.04 48.89
KXG30713 Sorghum golgi, vacuole 49.04 48.12
Os06t0220200-00 Rice endoplasmic reticulum, extracellular, vacuole 48.73 47.66
Os06t0220300-00 Rice extracellular 47.45 47.15
EER89439 Sorghum extracellular 50.32 44.76
HORVU6Hr1G077770.1 Barley mitochondrion, plastid 54.78 41.45
GSMUA_Achr7P12670_001 Banana endoplasmic reticulum, extracellular 14.33 40.18
KRH65072 Soybean cytosol 14.33 36.89
KRH60707 Soybean plasma membrane, vacuole 34.08 36.27
KRH51406 Soybean plasma membrane, vacuole 34.39 35.88
GSMUA_Achr6P30430_001 Banana endoplasmic reticulum 28.34 34.1
KRH40006 Soybean nucleus 35.99 32.47
KRG92438 Soybean nucleus 34.39 31.58
KRH23788 Soybean nucleus 34.39 31.03
KRH34361 Soybean nucleus 34.71 28.39
Zm00001d018106_P001 Maize plastid 48.41 25.5
HORVU7Hr1G036780.8 Barley golgi 27.07 24.15
HORVU6Hr1G077820.1 Barley endoplasmic reticulum 13.06 20.81
Protein Annotations
EMBL:ACUP02009006EnsemblPlants:KRH16766EnsemblPlantsGene:GLYMA_14G176400EntrezGene:100792222InterPro:EXORDIUM-likePANTHER:PTHR31279
PANTHER:PTHR31279:SF35PFAM:PF04674ProteinID:KRH16766ProteinID:KRH16766.1SignalP:SignalP-noTMUniParc:UPI000233AFB7
UniProt:I1MAV9MapMan:35.1::::
Description
hypothetical protein
Coordinates
chr14:+:43499072..43500462
Molecular Weight (calculated)
33555.2 Da
IEP (calculated)
9.703
GRAVY (calculated)
-0.087
Length
314 amino acids
Sequence
(BLAST)
001: MMASPTSPRV LFLSLFVTLS MILHLSSARK LSESDPQLQF QYHRGPLLTG KISVNLIWYG KFKPSQKAIV ADFITSLSSS KPLTAQPSVA TWWKATDKYY
101: KNSFPKLALS LGSQIVDENY SLGKSLTTNQ ILKLASKGPQ RNAINIVLTS AEVAVEGFCS SRCGTHGSSV GARVNGKRYK FAYMWVGNSE TQCPGQCAWP
201: FHQPIYGPQN PAPLVAPNND VGLDGMVINV ASLLAGTVTN PFGNGYFQGP KEAPLEAGSA CTGVYGKGAY PGYAGNLLVD PTTGASYNAN GVNGRKYLLP
301: ALVDPKTSSC STLV
Best Arabidopsis Sequence Match ( AT4G08950.1 )
(BLAST)
001: MYLLVFKLFL FLSLLQISVS ARNLASQEPN QFQLLKYHKG ALLSGKISVN LIWYGKFKPS QRAIISDFIT SLTHTSPTSK TLHQPSVATW WKTTEKYYKL
101: ATPSKNSSPL SLTLGKQIID ESCSLGKSLT DKKIQTLASK GDQRNAINVV LTSADVTVTG FGMSRCGTHG HARGLGKRGS KFAYIWVGNS ETQCPGQCAW
201: PFHAPVYGPQ SPPLVAPNND VGLDGMVINL ASLLAGTATN PFGNGYYQGP QNAPLEAASA CPGVYGKGAY PGYAGDLLVD TTTGGSFNAY GANGRKFLLP
301: ALYDPTTSAC STMV
Arabidopsis Description
EXOProtein EXORDIUM [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPE7]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.