Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G296200.1 | Wheat | endoplasmic reticulum | 97.2 | 96.59 |
| TraesCS6B01G347200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 95.33 | 96.23 |
| Os02t0756800-01 | Rice | extracellular | 80.37 | 78.66 |
| Zm00001d052206_P001 | Maize | plastid | 76.32 | 75.38 |
| EES05496 | Sorghum | golgi, vacuole | 75.7 | 73.64 |
| HORVU6Hr1G077770.1 | Barley | mitochondrion, plastid | 93.46 | 72.29 |
| Solyc04g074420.1.1 | Tomato | nucleus | 19.31 | 69.66 |
| TraesCS7A01G178500.1 | Wheat | extracellular | 69.47 | 69.04 |
| TraesCS7A01G178400.1 | Wheat | extracellular | 68.22 | 68.44 |
| TraesCS6A01G316900.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 63.55 | 65.81 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane | 52.96 | 65.38 |
| TraesCS6A01G316800.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 63.24 | 64.44 |
| GSMUA_Achr7P12690_001 | Banana | extracellular | 41.12 | 63.46 |
| KRH16765 | Soybean | nucleus | 56.39 | 57.83 |
| TraesCS6A01G316600.1 | Wheat | endoplasmic reticulum, extracellular | 53.89 | 55.63 |
| VIT_18s0001g06170.t01 | Wine grape | endoplasmic reticulum, vacuole | 54.83 | 55.35 |
| VIT_18s0001g06020.t01 | Wine grape | endoplasmic reticulum, vacuole | 54.52 | 55.03 |
| KRH53041 | Soybean | nucleus | 55.45 | 54.94 |
| KRH16766 | Soybean | nucleus | 53.58 | 54.78 |
| KRH72378 | Soybean | nucleus | 52.96 | 54.31 |
| VIT_18s0001g06150.t01 | Wine grape | vacuole | 53.89 | 54.23 |
| KRH53040 | Soybean | nucleus | 52.02 | 54.22 |
| Solyc04g074450.1.1 | Tomato | extracellular | 52.02 | 53.18 |
| PGSC0003DMT400079159 | Potato | vacuole | 53.27 | 53.11 |
| PGSC0003DMT400079209 | Potato | extracellular | 51.71 | 53.04 |
| PGSC0003DMT400079157 | Potato | endoplasmic reticulum, vacuole | 51.09 | 52.56 |
| Solyc04g074410.1.1 | Tomato | nucleus | 51.09 | 52.56 |
| AT4G08950.1 | Thale cress | extracellular, vacuole | 51.4 | 52.55 |
| CDX90701 | Canola | endoplasmic reticulum, vacuole | 50.78 | 52.41 |
| PGSC0003DMT400079158 | Potato | endoplasmic reticulum, vacuole | 50.78 | 52.41 |
| TraesCS7A01G178200.1 | Wheat | endoplasmic reticulum, vacuole | 52.02 | 52.35 |
| Bra000660.1-P | Field mustard | endoplasmic reticulum, vacuole | 50.78 | 51.91 |
| PGSC0003DMT400079207 | Potato | endoplasmic reticulum, vacuole | 51.4 | 51.89 |
| Solyc04g074440.1.1 | Tomato | nucleus | 50.47 | 51.43 |
| CDY05033 | Canola | endoplasmic reticulum, vacuole | 50.16 | 51.27 |
| PGSC0003DMT400079208 | Potato | endoplasmic reticulum, vacuole | 50.78 | 51.26 |
| PGSC0003DMT400079206 | Potato | endoplasmic reticulum, extracellular | 50.47 | 50.94 |
| AT1G35140.1 | Thale cress | extracellular | 48.29 | 50.16 |
| KRH62324 | Soybean | nucleus | 56.7 | 48.15 |
| TraesCS5A01G047700.1 | Wheat | vacuole | 48.29 | 47.69 |
| TraesCS5A01G047400.1 | Wheat | vacuole | 47.98 | 47.38 |
| KRH62323 | Soybean | plastid | 52.02 | 46.91 |
| Solyc04g074430.1.1 | Tomato | nucleus | 16.51 | 40.15 |
| TraesCS2A01G212700.1 | Wheat | extracellular | 36.14 | 35.05 |
| TraesCS4A01G417000.1 | Wheat | golgi | 36.14 | 33.53 |
| TraesCS7A01G071600.1 | Wheat | vacuole | 35.83 | 33.33 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G316700.1 | EnsemblPlantsGene:TraesCS6A01G316700 | InterPro:EXORDIUM-like | PANTHER:PTHR31279 | PANTHER:PTHR31279:SF34 | PFAM:PF04674 |
| SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr6A:+:553054875..553055840
Molecular Weight (calculated)
32829.2 Da
IEP (calculated)
8.381
GRAVY (calculated)
0.155
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGFSCTSTS HAAVALVSVL LLSLAHGSLG AHGARRLMEL YKPDPSELLT YHNGAVLQGA IPVTVLWYGR FTPAQKAVVS DFLLSLTAAS PAPTPSVSQW
101: WGTIAQLYLS KAKGANAKRA TQVALAGQVS DERCSLGKSL ALPQLAALAA RAKPRKGGIA LVLTAEDVAV EGFCRSRCGL HGSDAAARTA YVWVGNSASQ
201: CPGQCAWPFH KPAYGPQAPA LVAPSGDVGM DGMVMNVASM VAGAVTNPFG DGFYQGPREA PLEAATACPG VYGSGASPGY AGNLAVDATT GASYNANGAN
301: GRKYLLPALF DPDTSTCSTL V
101: WGTIAQLYLS KAKGANAKRA TQVALAGQVS DERCSLGKSL ALPQLAALAA RAKPRKGGIA LVLTAEDVAV EGFCRSRCGL HGSDAAARTA YVWVGNSASQ
201: CPGQCAWPFH KPAYGPQAPA LVAPSGDVGM DGMVMNVASM VAGAVTNPFG DGFYQGPREA PLEAATACPG VYGSGASPGY AGNLAVDATT GASYNANGAN
301: GRKYLLPALF DPDTSTCSTL V
001: MASFVMGYFL LFAVAFMCLD ARTDKTQDYT SFQYHKGALL TGDVSINLIW YGKFKPSQRA IVTDFVASLS SSRRSTMAQN PSVATWWKTV EKYYQFRKMT
101: TTRGLSLSLG EQILDQGYSM GKSLTEKNLK DLAAKGGQSY AVNVVLTSAD VTVQGFCMNR CGSHGTGSGS GKKGSRFAYI WVGNSETQCP GQCAWPFHAP
201: VYGPQSPPLV APNNDVGLDG MVINLASLMA ATATNPFGDG YYQGPKTAPL EAGSACTGVY GKGSYPGYAG ELLVDATTGG SYNVKGLNGR KYLLPALFDP
301: KTDSCSTLF
101: TTRGLSLSLG EQILDQGYSM GKSLTEKNLK DLAAKGGQSY AVNVVLTSAD VTVQGFCMNR CGSHGTGSGS GKKGSRFAYI WVGNSETQCP GQCAWPFHAP
201: VYGPQSPPLV APNNDVGLDG MVINLASLMA ATATNPFGDG YYQGPKTAPL EAGSACTGVY GKGSYPGYAG ELLVDATTGG SYNVKGLNGR KYLLPALFDP
301: KTDSCSTLF
Arabidopsis Description
EXL1Protein EXORDIUM-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6E4]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.