Factsheet for Os06t0220300-00

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	mitochondrion
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

extracellular: 24083427

msms PMID: 24083427 doi

T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu

Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g074420.1.1	Tomato	nucleus	17.72	62.92
Os06t0220200-00	Rice	endoplasmic reticulum, extracellular, vacuole	63.29	62.31
Os06t0220000-01	Rice	extracellular	51.27	57.24
Os02t0756200-02	Rice	extracellular	51.58	52.92
Os02t0756600-01	Rice	extracellular	49.68	50.16
Os02t0756800-01	Rice	extracellular	50.0	48.17
VIT_18s0001g06170.t01	Wine grape	endoplasmic reticulum, vacuole	48.1	47.8
KRH16765	Soybean	nucleus	47.15	47.6
VIT_18s0001g06020.t01	Wine grape	endoplasmic reticulum, vacuole	47.78	47.48
KRH16766	Soybean	nucleus	47.15	47.45
KRH72378	Soybean	nucleus	46.84	47.28
Solyc04g074450.1.1	Tomato	extracellular	46.84	47.13
VIT_18s0001g06150.t01	Wine grape	vacuole	47.47	47.02
PGSC0003DMT400079209	Potato	extracellular	46.52	46.96
CDX90701	Canola	endoplasmic reticulum, vacuole	46.2	46.95
AT1G35140.1	Thale cress	extracellular	45.89	46.93
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane	38.61	46.92
Solyc04g074410.1.1	Tomato	nucleus	46.2	46.79
PGSC0003DMT400079157	Potato	endoplasmic reticulum, vacuole	46.2	46.79
PGSC0003DMT400079206	Potato	endoplasmic reticulum, extracellular	46.84	46.54
Bra000660.1-P	Field mustard	endoplasmic reticulum, vacuole	46.2	46.5
KRH53040	Soybean	nucleus	45.25	46.43
PGSC0003DMT400079158	Potato	endoplasmic reticulum, vacuole	45.57	46.3
AT4G08950.1	Thale cress	extracellular, vacuole	45.89	46.18
GSMUA_Achr7P12690_001	Banana	extracellular	30.38	46.15
PGSC0003DMT400079159	Potato	vacuole	46.84	45.96
PGSC0003DMT400079207	Potato	endoplasmic reticulum, vacuole	46.2	45.91
PGSC0003DMT400079208	Potato	endoplasmic reticulum, vacuole	46.2	45.91
CDY05033	Canola	endoplasmic reticulum, vacuole	45.57	45.86
Solyc04g074440.1.1	Tomato	nucleus	44.94	45.08
Os06t0219900-01	Rice	extracellular, plasma membrane, vacuole	43.99	44.27
KRH53041	Soybean	nucleus	45.25	44.14
Os02t0757100-01	Rice	extracellular	43.35	44.05
Os10t0376400-00	Rice	extracellular, plasma membrane	42.72	40.42
Solyc04g074430.1.1	Tomato	nucleus	16.77	40.15
KRH62323	Soybean	plastid	44.3	39.33
KRH62324	Soybean	nucleus	45.89	38.36
Os07t0496700-01	Rice	extracellular	31.65	30.58
Os06t0133600-01	Rice	golgi, vacuole	31.65	28.74

Protein Annotations

EnsemblPlants:Os06t0220300-00	EnsemblPlantsGene:Os06g0220300	EntrezGene:4340515	InterPro:EXORDIUM-like	PANTHER:PTHR31279	PANTHER:PTHR31279:SF37
PFAM:PF04674	ProteinID:BAD37249.1	ProteinID:BAD37666.1	ProteinID:BAS96824.1	RefSeq:XP_015642092.1	SEG:seg
SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI0000426208	UniProt:Q67W03	MapMan:35.1	:

Description

Similar to Phi-1 protein. (Os06t0220300-00)

Coordinates

chr6:+:6199518..6200510

Molecular Weight (calculated)

32199.3 Da

IEP (calculated)

4.863

GRAVY (calculated)

0.254

Length

316 amino acids

Sequence
(BLAST)

001: MGNLLDMKVV AMVAALVVMS LAGVSMAARR VPALLKSHVG DGISYHGGAV LGGDIPVTLV WYGKFKPAQK AIVVDFLLSL TATPPNATTP SAAQWWGAIA
101: AGYLSSNATN VTTAARVVLA NQTSDEEYSL GKSLTLVEVF QLAAGVVPDR GDLVVVLTDR DVAVEGFCSA RCGVHGSDAG AGYAYAWAGD AERQCPGQCA
201: WPFAKPPYGP KGEAALVPPN GDVGADGVVA TLAGVLAGAV TNPFGDGYYL GDKDAALEAC SACAGAYGSD SYPGYAGKVL VDETTGGSYN AVGAHGRKYL
301: LPAVYDPATS RCTTLV

Best Arabidopsis Sequence Match ( AT1G35140.1 )
(BLAST)

001: MASFVMGYFL LFAVAFMCLD ARTDKTQDYT SFQYHKGALL TGDVSINLIW YGKFKPSQRA IVTDFVASLS SSRRSTMAQN PSVATWWKTV EKYYQFRKMT
101: TTRGLSLSLG EQILDQGYSM GKSLTEKNLK DLAAKGGQSY AVNVVLTSAD VTVQGFCMNR CGSHGTGSGS GKKGSRFAYI WVGNSETQCP GQCAWPFHAP
201: VYGPQSPPLV APNNDVGLDG MVINLASLMA ATATNPFGDG YYQGPKTAPL EAGSACTGVY GKGSYPGYAG ELLVDATTGG SYNVKGLNGR KYLLPALFDP
301: KTDSCSTLF

Arabidopsis Description

EXL1Protein EXORDIUM-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6E4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.