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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH53039 Soybean extracellular 90.79 89.66
KRH72379 Soybean extracellular, vacuole 64.44 64.24
KRH16767 Soybean extracellular, vacuole 63.49 63.29
VIT_18s0001g06030.t01 Wine grape extracellular, plasma membrane 60.32 63.12
KRH18203 Soybean nucleus 59.05 61.39
KRH10561 Soybean extracellular 57.46 60.94
KRH42138 Soybean nucleus 58.73 60.86
KRH43888 Soybean extracellular 55.87 59.66
GSMUA_Achr3P20420_001 Banana endoplasmic reticulum, vacuole 40.63 57.4
GSMUA_Achr10P... Banana endoplasmic reticulum, vacuole 55.56 56.45
GSMUA_AchrUn_... Banana endoplasmic reticulum, plasma membrane 53.65 55.78
GSMUA_Achr6P02120_001 Banana endoplasmic reticulum, plasma membrane 40.63 55.65
GSMUA_Achr8P14380_001 Banana extracellular 43.81 55.2
KRH16766 Soybean nucleus 53.02 53.18
VIT_18s0001g06180.t01 Wine grape plasma membrane, plastid, vacuole 60.95 53.04
KRH53040 Soybean nucleus 51.75 52.92
Os06t0219900-01 Rice extracellular, plasma membrane, vacuole 52.7 52.87
KRH16765 Soybean nucleus 52.38 52.72
KRH72378 Soybean nucleus 52.06 52.4
KRH53041 Soybean nucleus 53.65 52.16
OQU81032 Sorghum extracellular 52.06 51.9
HORVU7Hr1G036710.2 Barley endoplasmic reticulum, extracellular, plasma membrane 51.75 51.26
TraesCS7D01G180100.1 Wheat endoplasmic reticulum, plasma membrane 51.43 50.94
TraesCS7B01G083900.1 Wheat endoplasmic reticulum, vacuole 51.43 50.94
Zm00001d052799_P001 Maize endoplasmic reticulum, extracellular 49.52 50.81
TraesCS7A01G178200.1 Wheat endoplasmic reticulum, vacuole 51.43 50.78
KXG19617 Sorghum golgi, mitochondrion, vacuole 52.38 50.3
Zm00001d037204_P001 Maize golgi, mitochondrion 52.06 50.15
KRH62324 Soybean nucleus 54.29 45.24
KRH62323 Soybean plastid 51.11 45.22
KRH65072 Soybean cytosol 15.56 40.16
KRH60707 Soybean plasma membrane, vacuole 33.02 35.25
KRH51406 Soybean plasma membrane, vacuole 32.06 33.55
KRH40006 Soybean nucleus 34.92 31.61
KRH23788 Soybean nucleus 34.6 31.32
KRG92438 Soybean nucleus 33.02 30.41
KRH34361 Soybean nucleus 33.33 27.34
Protein Annotations
EMBL:ACUP02002235EnsemblPlants:KRH62322EnsemblPlantsGene:GLYMA_04G100200EntrezGene:100779037InterPro:EXORDIUM-likePANTHER:PTHR31279
PANTHER:PTHR31279:SF8PFAM:PF04674ProteinID:KRH62322ProteinID:KRH62322.1SEG:segSignalP:SignalP-noTM
UniParc:UPI000233A0BCUniProt:K7KJ92MapMan:35.1:::
Description
hypothetical protein
Coordinates
chr4:-:9187451..9188988
Molecular Weight (calculated)
33889.0 Da
IEP (calculated)
9.822
GRAVY (calculated)
0.103
Length
315 amino acids
Sequence
(BLAST)
001: MLILRLAIFV ASLVVVVQSH VPNIWEAKPF HHMLSLVQPD PVVLNYHRGP LLKGNVTVHI NWYGNFTPIH RSIIVDFIQS LGSIPHSRHH PSPFSWWRIT
101: ARYRGGPRTL TVGNQTLDNT YSLGKSLKTS HLLALASKNS PPTTRSNANA IHVLLTSADV AVDGFCMSRC GTHGSGRVAK RRIAFAWVGN PVTQCPGECA
201: WPFHQPVYGP QTPPLVPPNG DVGVDGMLIS LATVLAGAVT NPFGNGYYQG SVTAPLEAVS ACAGIFGKGA YPGYTGNVLV DNVTGASYNA LGLHGRKFLL
301: PAMWDPVTST CKTLV
Best Arabidopsis Sequence Match ( AT1G35140.1 )
(BLAST)
001: MASFVMGYFL LFAVAFMCLD ARTDKTQDYT SFQYHKGALL TGDVSINLIW YGKFKPSQRA IVTDFVASLS SSRRSTMAQN PSVATWWKTV EKYYQFRKMT
101: TTRGLSLSLG EQILDQGYSM GKSLTEKNLK DLAAKGGQSY AVNVVLTSAD VTVQGFCMNR CGSHGTGSGS GKKGSRFAYI WVGNSETQCP GQCAWPFHAP
201: VYGPQSPPLV APNNDVGLDG MVINLASLMA ATATNPFGDG YYQGPKTAPL EAGSACTGVY GKGSYPGYAG ELLVDATTGG SYNVKGLNGR KYLLPALFDP
301: KTDSCSTLF
Arabidopsis Description
EXL1Protein EXORDIUM-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6E4]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.