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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 5
  • golgi 5
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX92021 Canola endoplasmic reticulum, extracellular, vacuole 99.39 99.39
CDX74229 Canola endoplasmic reticulum, extracellular, vacuole 99.08 98.78
Bra032025.1-P Field mustard golgi, plasma membrane, vacuole 82.26 83.02
AT3G02970.1 Thale cress endoplasmic reticulum, extracellular, golgi 81.04 79.82
VIT_16s0039g01800.t01 Wine grape cytosol 29.97 44.55
KRH60707 Soybean plasma membrane, vacuole 32.42 35.93
KRH51406 Soybean plasma membrane, vacuole 32.72 35.55
Bra009384.1-P Field mustard endoplasmic reticulum, extracellular 29.36 32.32
Bra031927.1-P Field mustard endoplasmic reticulum, extracellular 29.97 32.24
Bra028634.1-P Field mustard extracellular 29.36 31.79
Bra028635.1-P Field mustard extracellular 28.44 31.53
Bra024280.1-P Field mustard endoplasmic reticulum, extracellular 28.44 30.59
Bra000660.1-P Field mustard endoplasmic reticulum, vacuole 29.05 30.25
Bra005364.1-P Field mustard endoplasmic reticulum, vacuole 24.46 24.92
Bra022553.1-P Field mustard vacuole 22.94 22.26
Bra002034.1-P Field mustard endoplasmic reticulum, vacuole 23.55 21.51
Protein Annotations
EnsemblPlants:Bra001070.1EnsemblPlants:Bra001070.1-PEnsemblPlantsGene:Bra001070InterPro:EXORDIUM-likePANTHER:PTHR31279PANTHER:PTHR31279:SF13
PFAM:PF04674SEG:segSignalP:SignalP-noTMUniParc:UPI00025408DDUniProt:M4CA41MapMan:35.1
Description
AT3G02970 (E=8e-151) EXL6 | EXL6 (EXORDIUM LIKE 6)
Coordinates
chrA03:-:14596758..14597856
Molecular Weight (calculated)
36134.3 Da
IEP (calculated)
8.051
GRAVY (calculated)
-0.205
Length
327 amino acids
Sequence
(BLAST)
001: MASSSSSSLF VITFLLFSPL CFSRESPSQI PDGTLNLSLL WYGQFTPVQK ERVRDFIESL NFDAKEGLDP KVSAWWKVVE GYQERYEVKE IYRQKSSSRT
101: VAPKIKVKVV RSYVDEKMMF GKDLTIDNGE KLVETAVGNM SKVVPVVLLS SQVRAHHVGF CNGTCQEYGL TIKSNIKGQE KKQPYVMVSD PEVQCPGECA
201: WPFHIANKGP HGMTYQPPSG EIGADALIIQ LATGLADVAT NPAITESLFK SEPPYSTDGN HTSSIYIVDP ATKCFRVFGS GAFPGFTGRI RVDPLTGGAF
301: NSHGINHLKF LIPSIWDPKT KSCYTPM
Best Arabidopsis Sequence Match ( AT3G02970.1 )
(BLAST)
001: MAMASASSSS SSISVIIFLL LAPLCLSREP PSQIPNGTLD LSLLWYGQFT PTQKERVHDF IESLNFDAKE GLDPKVSAWW KVVESYQERF EVKDIYRQKK
101: SNRTVAPRIK VKVVRSYVDE KMKYGKELTM GNGEKLVETA IGNMSKVVPV VLLSAQVRAH GVGFCDGTCQ HNALAKIKGQ KEPRRYIMVS NPEVECPGEC
201: AWPFHTADKG PRGMTYQPAS GEVGADALVI QLATGLADLA TNPDLTKSLF KSETTPYNDD VKKNHESSSM YIVDPATKCT RVFGSGAFPG FTGRIRVDPI
301: TGGAFNSHGI NHLKFLIPSI WDPKTKSCWT PM
Arabidopsis Description
EXL6Protein EXORDIUM-like 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8T8]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.