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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 6
  • golgi 5
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY24324 Canola endoplasmic reticulum, vacuole 100.0 100.0
AT2G17230.1 Thale cress endoplasmic reticulum, vacuole 89.94 88.71
VIT_03s0038g03860.t01 Wine grape extracellular 70.67 73.55
KRG92438 Soybean nucleus 70.11 73.39
Solyc10g074540.1.1 Tomato nucleus 70.11 72.97
KRH65072 Soybean cytosol 24.58 72.13
PGSC0003DMT400043340 Potato extracellular 70.11 71.31
KRH34361 Soybean nucleus 69.27 64.58
Bra005364.1-P Field mustard endoplasmic reticulum, vacuole 49.16 54.83
Bra022553.1-P Field mustard vacuole 49.72 52.82
Bra000660.1-P Field mustard endoplasmic reticulum, vacuole 31.01 35.35
Bra024280.1-P Field mustard endoplasmic reticulum, extracellular 28.21 33.22
Bra031927.1-P Field mustard endoplasmic reticulum, extracellular 27.65 32.57
Bra009384.1-P Field mustard endoplasmic reticulum, extracellular 25.98 31.31
Bra028635.1-P Field mustard extracellular 24.3 29.49
Bra028634.1-P Field mustard extracellular 24.58 29.14
Bra001070.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 21.51 23.55
Bra032025.1-P Field mustard golgi, plasma membrane, vacuole 20.11 22.22
Protein Annotations
EnsemblPlants:Bra002034.1EnsemblPlants:Bra002034.1-PEnsemblPlantsGene:Bra002034InterPro:EXORDIUM-likePANTHER:PTHR31279PANTHER:PTHR31279:SF36
PFAM:PF04674SEG:segSignalP:SignalP-noTMUniParc:UPI0002543EFCUniProt:M4CCV3MapMan:35.1
Description
AT2G17230 (E=5e-179) EXL5 | EXL5 (EXORDIUM LIKE 5)
Coordinates
chrA10:+:12016370..12017446
Molecular Weight (calculated)
38887.3 Da
IEP (calculated)
7.872
GRAVY (calculated)
-0.147
Length
358 amino acids
Sequence
(BLAST)
001: MSSPAINLFF ALFSFLIFSV SSSLPQSQTK NPATVQTLNV PAAEIKMVNP KLPPRSLSLT SSKRYEGSSD LVHLRYHMGP VLSSAPINIY VIWYGRWSRP
101: HKALIRDFLN SISDAKAPSP SVAEWWRTAS LYTDQTGANV SRSVLIAGEY SDAKYSHGQH LTRLSIQEVI ASAARSASFP VDHKNGMYLV LTSHDVTMQD
201: FCRAVCGFHY FTFPSMVGYT MPYAWVGQSG KQCPEVCAYP FALPGYMGHG GPGELRPPNG ETGVDGMVSV IGHELAEVVS NPLINAWYAG EDPTAPTEIG
301: DLCEGLYGTG GGGGYIGQVM QDRGGKTFNM NGKGGRKFLV QWIWNPNLKA CSGPNSVD
Best Arabidopsis Sequence Match ( AT2G17230.1 )
(BLAST)
001: MSSPATTITF FFFFTLSSFF YITSSLQNNN NNKHTATVNS LNIPSAAAEI TLVNPKLPPR SLSLTSSKKF EGSSNLVHLR YHMGPVLSSS PINIYVIWYG
101: QWSRPHKSLI RDFLNSISDA KAPSPSVSEW WRTASLYTDQ TGSNVSRSVL IAGEYSDSKY SHGQHLTRLT IQEVIASAAR SASFPVDHKN GMYLVLTSHD
201: VTMQDFCRAV CGFHYFTFPS MVGYTMPYAW VGQSGKQCPE VCAYPFALPG YMGHGGPGEL RPPNGETGVD GMVSVIGHEL AEVVSNPLIN AWYAGEDPTA
301: PTEIGDLCEG LYGSGGGGGY IGQVMRDREG KTFNMNGKGG RKFLVQWIWN PNLKACSGPN SVD
Arabidopsis Description
EXL5Protein EXORDIUM-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SII5]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.