Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plastid, peroxisome, mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 3
- peroxisome 1
- plastid 2
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P24600_001 | Banana | cytosol | 13.93 | 18.11 |
| GSMUA_Achr6P01320_001 | Banana | mitochondrion | 15.38 | 17.05 |
| GSMUA_Achr7P20870_001 | Banana | plastid | 14.97 | 15.75 |
| VIT_03s0110g00560.t01 | Wine grape | mitochondrion | 8.73 | 15.56 |
Protein Annotations
| Gene3D:3.30.1220.10 | Gene3D:3.40.50.300 | Gene3D:3.90.1150.10 | MapMan:35.2 | InterPro:Cbl_biosynth_CobW-like_C | InterPro:CobW-likC_sf |
| InterPro:CobW/HypB/UreG_dom | GO:GO:0003674 | GO:GO:0003824 | EnsemblPlantsGene:GSMUA_Achr10G00160_001 | EnsemblPlants:GSMUA_Achr10P00160_001 | EnsemblPlants:GSMUA_Achr10T00160_001 |
| InterPro:IPR015422 | InterPro:IPR036627 | UniProt:M0RE43 | InterPro:P-loop_NTPase | PFAM:PF02492 | PFAM:PF07683 |
| PANTHER:PTHR13748 | InterPro:PyrdxlP-dep_Trfase_dom1 | SMART:SM00833 | SUPFAM:SSF52540 | SUPFAM:SSF90002 | UniParc:UPI000295E2AD |
| SEG:seg | : | : | : | : | : |
Description
Putative Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K [Source:GMGC_GENE;Acc:GSMUA_Achr10G00160_001]
Coordinates
chr10:+:523149..539661
Molecular Weight (calculated)
52605.0 Da
IEP (calculated)
6.062
GRAVY (calculated)
-0.033
Length
481 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCTLITGFL GGGKTTLLKH LLDHRGDLRL AVLVNEFADS DVDSLLLDSA RLNRAFNLST VSLTHGCACC EVSGPFRESL QRIVDSKHNF DCLLIETSGL
101: ARPDKFVAEL KEVGIHLDLV VAVVDAESLD KIIKIDIVRK QLEHVDIVLL NKCDLATLSQ ISNAEDILEE LTAGAKVVRS QFCKVPVDLI IDCSKLQALN
201: IEKNDESMPG VLSHESLPKM AFQRYIYDNS PLQFSSSGHT SNQPSVGGDS SSTDDLHPGF PHGESFSSAT FEAEVPLSLV VFQSKVLKSM RCASSLIRAK
301: GIIWFAENRE SRFVFQWSGL KRVEAISGQP WESSPKSCIV LIGTDKSELQ TIISQLSASA NPHNEVSSEY GNLREHAKSF ASMVASDDRF KEPSLNKTPL
401: VIFGLKGSPL RGVKESQLSG ALMHVVNGKG NIFLTATTFG EDYNLQILLD EKSTVIDAWS EIRSATSIVV SKVCKNFCPC R
101: ARPDKFVAEL KEVGIHLDLV VAVVDAESLD KIIKIDIVRK QLEHVDIVLL NKCDLATLSQ ISNAEDILEE LTAGAKVVRS QFCKVPVDLI IDCSKLQALN
201: IEKNDESMPG VLSHESLPKM AFQRYIYDNS PLQFSSSGHT SNQPSVGGDS SSTDDLHPGF PHGESFSSAT FEAEVPLSLV VFQSKVLKSM RCASSLIRAK
301: GIIWFAENRE SRFVFQWSGL KRVEAISGQP WESSPKSCIV LIGTDKSELQ TIISQLSASA NPHNEVSSEY GNLREHAKSF ASMVASDDRF KEPSLNKTPL
401: VIFGLKGSPL RGVKESQLSG ALMHVVNGKG NIFLTATTFG EDYNLQILLD EKSTVIDAWS EIRSATSIVV SKVCKNFCPC R
001: MATLSTLEIA TTFLSFTAPR SSAAFNYRFS SAAVSVLSRP RATTVSVRTT PSFFYSPVVR RQRFSSVSAS ATQTEDSDVT TKIPPDNRIP ATIITGFLGS
101: GKTTLLNHIL TRDHGKRIAV IENEFGEVDI DGSLVASKSI GAEDIVMLNN GCLCCTVRGD LVRMIGELVN TKKGKFDHIV IETTGLANPA PIIQTFYAEE
201: EIFNDVKLDG VVTLVDAKHA RLHLDEVKPE GVVNEAVEQI AYADRIIVNK TDLVGEAELG SVVQRIKTIN SMAQMTRTKY GNVDLDYVLG IGGFDLERIE
301: SSVNEDDKGD HHDHDHDHHH DHNHDHDHHH HDGHDHHHHS HDHTHDPGVS SVSIVCEGSL DLEKANMWLG TLLMERSEDI YRMKGLLSVH TMEERFVFQG
401: VHDIFQGSPD RLWGREEERV NKIVFIGKNL NREELEKGFK ACLI
101: GKTTLLNHIL TRDHGKRIAV IENEFGEVDI DGSLVASKSI GAEDIVMLNN GCLCCTVRGD LVRMIGELVN TKKGKFDHIV IETTGLANPA PIIQTFYAEE
201: EIFNDVKLDG VVTLVDAKHA RLHLDEVKPE GVVNEAVEQI AYADRIIVNK TDLVGEAELG SVVQRIKTIN SMAQMTRTKY GNVDLDYVLG IGGFDLERIE
301: SSVNEDDKGD HHDHDHDHHH DHNHDHDHHH HDGHDHHHHS HDHTHDPGVS SVSIVCEGSL DLEKANMWLG TLLMERSEDI YRMKGLLSVH TMEERFVFQG
401: VHDIFQGSPD RLWGREEERV NKIVFIGKNL NREELEKGFK ACLI
Arabidopsis Description
PTAC17At1g80480 [Source:UniProtKB/TrEMBL;Acc:Q9M8L6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.