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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 3
  • mitochondrion 6
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU82250 Sorghum mitochondrion 64.75 73.75
TraesCS2A01G439900.1 Wheat mitochondrion 67.51 72.7
Os04t0599700-01 Rice mitochondrion 67.51 71.29
VIT_02s0033g00320.t01 Wine grape mitochondrion 66.82 69.88
PGSC0003DMT400024048 Potato plastid 65.21 66.75
KRH07678 Soybean cytosol 19.82 64.18
KRH07677 Soybean mitochondrion 45.39 56.77
GSMUA_Achr7P20870_001 Banana plastid 49.77 47.26
Solyc08g076020.2.1 Tomato nucleus 66.13 33.76
GSMUA_Achr6P24600_001 Banana cytosol 26.96 31.62
GSMUA_Achr10P... Banana cytosol, mitochondrion, peroxisome, plastid 17.05 15.38
Protein Annotations
EnsemblPlants:GSMUA_Achr6P01320_001EnsemblPlants:GSMUA_Achr6T01320_001EnsemblPlantsGene:GSMUA_Achr6G01320_001Gene3D:3.30.1220.10Gene3D:3.40.50.300InterPro:Cbl_biosynth_CobW-like_C
InterPro:CobW-likC_sfInterPro:CobW/HypB/UreG_domInterPro:IPR036627InterPro:P-loop_NTPasePANTHER:PTHR13748PANTHER:PTHR13748:SF40
PFAM:PF02492PFAM:PF07683SEG:segSMART:SM00833SUPFAM:SSF52540SUPFAM:SSF90002
UniParc:UPI000296E7B5UniProt:M0T380MapMan:15.6.1.2.3.7:::
Description
Putative COBW domain-containing protein 1 [Source:GMGC_GENE;Acc:GSMUA_Achr6G01320_001]
Coordinates
chr6:-:866106..871684
Molecular Weight (calculated)
47830.4 Da
IEP (calculated)
6.847
GRAVY (calculated)
-0.125
Length
434 amino acids
Sequence
(BLAST)
001: MAVRFLIPRA SKTLSHHLLR SPPSRVDSIP SAAGVSGCLR ALHSVVSRSS RPFYRRGIFP PFSRFMVSAS SPRLDLAEAV SSALDIDIRV PATVITGFLG
101: SGKTTLLNHI LTSQHGKRIA VIENEFGEVD IDSSLVASHS SVSEDIVMVN NGCLCCTVRG DLVKMLLKLV KNKRDKFDHI VIETTGLAKP SPVIETFCSD
201: ELVARYVKLD GVVTLVDCKH AMRHLDEVKP RWVVNEAVEQ VAYADRIILN KTDLVNEAEL DALTNRIKLI NGMAQIKQAK HSIVDMDFVL GIGGYDLDRI
301: ETDVQVEASH DKGHHCGNGH DHHGEHGGHH HDHVHDSSVT SISIVSEGTL DLDEVNDWLE RLVDEKGEDL YRMKGVVSVN DSTGRFVFQG VHSMLDGCPA
401: KPWGPDEKRI NKLVFIGRNL DEAALRKAFK GCLI
Best Arabidopsis Sequence Match ( AT1G80480.1 )
(BLAST)
001: MATLSTLEIA TTFLSFTAPR SSAAFNYRFS SAAVSVLSRP RATTVSVRTT PSFFYSPVVR RQRFSSVSAS ATQTEDSDVT TKIPPDNRIP ATIITGFLGS
101: GKTTLLNHIL TRDHGKRIAV IENEFGEVDI DGSLVASKSI GAEDIVMLNN GCLCCTVRGD LVRMIGELVN TKKGKFDHIV IETTGLANPA PIIQTFYAEE
201: EIFNDVKLDG VVTLVDAKHA RLHLDEVKPE GVVNEAVEQI AYADRIIVNK TDLVGEAELG SVVQRIKTIN SMAQMTRTKY GNVDLDYVLG IGGFDLERIE
301: SSVNEDDKGD HHDHDHDHHH DHNHDHDHHH HDGHDHHHHS HDHTHDPGVS SVSIVCEGSL DLEKANMWLG TLLMERSEDI YRMKGLLSVH TMEERFVFQG
401: VHDIFQGSPD RLWGREEERV NKIVFIGKNL NREELEKGFK ACLI
Arabidopsis Description
PTAC17At1g80480 [Source:UniProtKB/TrEMBL;Acc:Q9M8L6]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.