Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- peroxisome 1
- mitochondrion 4
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH07678 | Soybean | cytosol | 23.58 | 74.63 |
| VIT_02s0033g00320.t01 | Wine grape | mitochondrion | 69.58 | 71.08 |
| TraesCS2A01G439900.1 | Wheat | mitochondrion | 64.86 | 68.24 |
| OQU82250 | Sorghum | mitochondrion | 60.85 | 67.72 |
| Os04t0599700-01 | Rice | mitochondrion | 65.33 | 67.4 |
| GSMUA_Achr6P01320_001 | Banana | mitochondrion | 66.75 | 65.21 |
| KRH07677 | Soybean | mitochondrion | 48.58 | 59.37 |
| PGSC0003DMT400036661 | Potato | plastid | 52.12 | 48.68 |
| Solyc08g076020.2.1 | Tomato | nucleus | 86.79 | 43.29 |
| PGSC0003DMT400072954 | Potato | cytosol | 29.48 | 33.69 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400024048 | EnsemblPlantsGene:PGSC0003DMG400009303 | EntrezGene:102596998 | Gene3D:3.30.1220.10 | Gene3D:3.40.50.300 | InterPro:Cbl_biosynth_CobW-like_C |
| InterPro:CobW-likC_sf | InterPro:CobW/HypB/UreG_dom | InterPro:IPR036627 | InterPro:P-loop_NTPase | PANTHER:PTHR13748 | PANTHER:PTHR13748:SF40 |
| PFAM:PF02492 | PFAM:PF07683 | PGSC:PGSC0003DMG400009303 | RefSeq:XP_006352938.1 | SEG:seg | SMART:SM00833 |
| SUPFAM:SSF52540 | SUPFAM:SSF90002 | UniParc:UPI000294FEEE | UniProt:M1AJD2 | MapMan:15.6.1.2.3.7 | : |
Description
Prli-interacting factor l [Source:PGSC_GENE;Acc:PGSC0003DMG400009303]
Coordinates
chr8:-:48609877..48615043
Molecular Weight (calculated)
47186.0 Da
IEP (calculated)
6.406
GRAVY (calculated)
-0.308
Length
424 amino acids
Sequence
(BLAST)
(BLAST)
001: MATLRYLLSK SSTPLKLSNP FHLNRSNNFP HISQFLRALN SFVSREFHCH SPNSRSFSTS PEYVAQDSDS SIAAALSLDS RVPATVITGF LGSGKTTLLN
101: HILTSQHGKR IAVIENEFGE VDIDGSLVAS HSSSNEEILM VNNGCLCCTV RGDLVKMLLE LVKNRRDKFD HIVIETTGLA KPGPVIETFC SDELVSRHVK
201: LDGVVTLVDC KHALQHLNKV KPRFVSNEAV EQVAYADRII LNKIDLVTES ELEVLTKRIK HINGMAQIKR AKHGMVDMDF VLGVGGYDLD RVDSEVQSEG
301: SHCGHKHEDG HEHHKGHHHD HVHDSAVSSV SIVSEGALDL DEVDDWLERL IEENGDDLYR MKGVLSVSDS EQRYVFQGVH SILDGCPGKT WEPNEKRINK
401: LVFIGRNLDE TALRKGFKGC LCEE
101: HILTSQHGKR IAVIENEFGE VDIDGSLVAS HSSSNEEILM VNNGCLCCTV RGDLVKMLLE LVKNRRDKFD HIVIETTGLA KPGPVIETFC SDELVSRHVK
201: LDGVVTLVDC KHALQHLNKV KPRFVSNEAV EQVAYADRII LNKIDLVTES ELEVLTKRIK HINGMAQIKR AKHGMVDMDF VLGVGGYDLD RVDSEVQSEG
301: SHCGHKHEDG HEHHKGHHHD HVHDSAVSSV SIVSEGALDL DEVDDWLERL IEENGDDLYR MKGVLSVSDS EQRYVFQGVH SILDGCPGKT WEPNEKRINK
401: LVFIGRNLDE TALRKGFKGC LCEE
001: MATLSTLEIA TTFLSFTAPR SSAAFNYRFS SAAVSVLSRP RATTVSVRTT PSFFYSPVVR RQRFSSVSAS ATQTEDSDVT TKIPPDNRIP ATIITGFLGS
101: GKTTLLNHIL TRDHGKRIAV IENEFGEVDI DGSLVASKSI GAEDIVMLNN GCLCCTVRGD LVRMIGELVN TKKGKFDHIV IETTGLANPA PIIQTFYAEE
201: EIFNDVKLDG VVTLVDAKHA RLHLDEVKPE GVVNEAVEQI AYADRIIVNK TDLVGEAELG SVVQRIKTIN SMAQMTRTKY GNVDLDYVLG IGGFDLERIE
301: SSVNEDDKGD HHDHDHDHHH DHNHDHDHHH HDGHDHHHHS HDHTHDPGVS SVSIVCEGSL DLEKANMWLG TLLMERSEDI YRMKGLLSVH TMEERFVFQG
401: VHDIFQGSPD RLWGREEERV NKIVFIGKNL NREELEKGFK ACLI
101: GKTTLLNHIL TRDHGKRIAV IENEFGEVDI DGSLVASKSI GAEDIVMLNN GCLCCTVRGD LVRMIGELVN TKKGKFDHIV IETTGLANPA PIIQTFYAEE
201: EIFNDVKLDG VVTLVDAKHA RLHLDEVKPE GVVNEAVEQI AYADRIIVNK TDLVGEAELG SVVQRIKTIN SMAQMTRTKY GNVDLDYVLG IGGFDLERIE
301: SSVNEDDKGD HHDHDHDHHH DHNHDHDHHH HDGHDHHHHS HDHTHDPGVS SVSIVCEGSL DLEKANMWLG TLLMERSEDI YRMKGLLSVH TMEERFVFQG
401: VHDIFQGSPD RLWGREEERV NKIVFIGKNL NREELEKGFK ACLI
Arabidopsis Description
PTAC17At1g80480 [Source:UniProtKB/TrEMBL;Acc:Q9M8L6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.